Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0009 ATGTCATCACACTTTCACATAACAGGATTGTGTGTGCTGCTAGCAGATCAAGAGATGACAGATATGCATGAAAATACCACTATGCCTGGCTGTGACGACGATATCCTTGAAAGTGCTCTCGATGCAGATCCTCTCAATGATAGACTATCATCAGAGATCCCCTCAGAGCCCTTTGAAGGAATGGACTTTGCATCAATTGAAGATGTAAAGAATTACTACGTAAGATATGCCAAGAGTAAAGGTTTTAGCTTTCGCATGGGTAAATCAAGAACAAATGGTATGGTAATTGGTCAAGAGATTGTTTGTTCAAAGGAGGGATTGTTACAACTGTGCGCAGGAAATTATCGGAGAATAATAGCGATTTTCAACAAGATCACAGTCATGATGCAATGGAAGTTACCTCACATTGGCTACTTGGCTTTTCTTTAG 429 0.4009 MSSHFHITGLCVLLADQEMTDMHENTTMPGCDDDILESALDADPLNDRLSSEIPSEPFEGMDFASIEDVKNYYVRYAKSKGFSFRMGKSRTNGMVIGQEIVCSKEGLLQLCAGNYRRIIAIFNKITVMMQWKLPHIGYLAFL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0009 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 109 - -
Mtr3g0009 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0009 Mtr-Chr3 121073 122215 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g0009 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g0009 - - mtr:MTR_3g005220 292.737