Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3777 ATGTCAATGTCATCTTCAGATGCTGAGGCCCTATTGAAGTTCAAGGGTTCATTGACAAATGCGGTAGCCCTCAGCAGTTGGGATCCATCCATAAACCCAAAACCACCGTGTCAAGGAACCATTCCGAATTGGGTGGGCTTGTTTTGTTTGAATGATAGGGTGTGGGGGTTACGCCTTGAGAGCATGGGATTAACCGGAAATATTGATTTGGCATCTCTTGCTTCAATGCCGGCATTGCGAACACTTAGCCTAATGAATAATACATTTGTTGGTCCCTTGCCCGACATAAAGTTGTTGCCCAATTTGAGGGCCCTTTACCTGTCCTATAATCATTTCTCCGGACAAATACCCGATGATGCATTTGCAGGTTTGCCTAGGTTGAGGAAAGCGCATTTGTCTAATAATGAGTTCACCGGTAAAATTCCATCAACTATTGCTACCTTGCCTATTATTGTCGTCCTTAGGCTTGACTCAAACAAGTTTCAAGGTGAAATCCCCAATTTTCGAAACAAGAATAGTTTGAAAGTTATCAACTTATCTAACAACGAGTTAGAGGGTCCTATACCACCTAATCTAAGACACTTCGACGCCTCCTCATTTAGCGGAAACGCACTTCTATGTGGGCCTCCTTTGATGAATCAATGTCAATTACCTGCAGCAGGAAAGGAGACTGGTACTCTATCCAATCTGCTCGTTATGAAAACATCACTTATTGTGATTTCAATAGCATTTTTAGTAGTCATTGTGGTTTCAATATTTGTCATCTTTCGTTTGAAGTCCCAGAAGAAGCAGTTAGATGATGAACACCATTCTTCTATGATTTCAACATTCCATGCGCAGGCCTCCAAAAAATATGTTAAGCCTCCTGTAGTTTATGTGAAAACCAAAAGCTTGGCCGAACATTATGATCCCGAAAGTCCTAAGCATGATCGCCACAGTCATGGACATTCCAAAAAGGGGGAACAAGGCAAGCTTATATTCCTTAGGCAGGATGGAATAACGTTTGATTTACAGGATTTGCTAAAGGCGTCTGCTGAAATTCTAGGTAGTGCCTCATTTGGGTCATCGTATAAAGCGGTGATTTTGGACGGACTTAAGTCCGTGGTTGTCAAAAGGTACAAGCAGATGAACAATGTACCGAGAGAAGAGTTCCATGAGCACATGAGAAGGTTAGGAAACCTTAACCACCCCAATGTTCTACCTCTCATTTCTTATTACTATAGAAGAGAAGAGAAGCTTTTGATCTCTGGATTTGTTCACAACGGTTGCTTGGGTAGTCATCTTCATGGTAACCACAACTATGAGAAGCCAGGACTTGATTGGGGAACCCGTTTGAAAATAGTGAAAGGTGTAGCAAGGGGTTTGTCTTATCTATACAGTGCACTCCCAAGTGTGATTGTACCTCATGGTCATCTAAAATCTTCGAATGTACTTTTAGATGAATCTTTTGAGCCCTTGCTCACTGATTATGCCCTAAGTCCTGTTATAAACCTTGACCACGCCCAACAAATAATCATGCCTTACAAATCCCCAGAGTATGCTCAACTGGGTCGTATTACAAAGAAAACTGATGTGTGGAGTTTTGGGATTCTAATATTGGAGATACTAACGGGTAAATTCCCAGAGAACTATATTACACCAAGGTATAATAGTGATTCTGACTTAGCAAGTTGGGTAAATATGTTAATTACTGAGAAGAGGACAAGTGAGGTATTTGACGTTGAGATGGGAGGAATCGGAACTAGTAAAGCTGAATTACTCAAACTATTAAAGATTGGTCTAAGTTGTTGTGAAGAGAATGTTGAAAGAAGGTTGGACATCAAAGAGGCTCTTCAACAGATTGAAGAATTGAAAGAAACAACAATTGATGGAGGAGAATACTCTTCCTCCCTTATCACCTCTACCGAAAGGGATGCTTACAGAGCTGTGTGA 1932 0.4115 MSMSSSDAEALLKFKGSLTNAVALSSWDPSINPKPPCQGTIPNWVGLFCLNDRVWGLRLESMGLTGNIDLASLASMPALRTLSLMNNTFVGPLPDIKLLPNLRALYLSYNHFSGQIPDDAFAGLPRLRKAHLSNNEFTGKIPSTIATLPIIVVLRLDSNKFQGEIPNFRNKNSLKVINLSNNELEGPIPPNLRHFDASSFSGNALLCGPPLMNQCQLPAAGKETGTLSNLLVMKTSLIVISIAFLVVIVVSIFVIFRLKSQKKQLDDEHHSSMISTFHAQASKKYVKPPVVYVKTKSLAEHYDPESPKHDRHSHGHSKKGEQGKLIFLRQDGITFDLQDLLKASAEILGSASFGSSYKAVILDGLKSVVVKRYKQMNNVPREEFHEHMRRLGNLNHPNVLPLISYYYRREEKLLISGFVHNGCLGSHLHGNHNYEKPGLDWGTRLKIVKGVARGLSYLYSALPSVIVPHGHLKSSNVLLDESFEPLLTDYALSPVINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYITPRYNSDSDLASWVNMLITEKRTSEVFDVEMGGIGTSKAELLKLLKIGLSCCEENVERRLDIKEALQQIEELKETTIDGGEYSSSLITSTERDAYRAV* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3777 643 Pfam Leucine rich repeat 100 161 IPR001611 GO:0005515
Mtr2g3777 643 Pfam Leucine Rich Repeat 173 195 IPR001611 GO:0005515
Mtr2g3777 643 SUPERFAMILY L domain-like 35 212 - -
Mtr2g3777 643 Pfam Protein tyrosine and serine/threonine kinase 346 550 IPR001245 GO:0004672|GO:0006468
Mtr2g3777 643 Gene3D Ribonuclease Inhibitor 96 217 IPR032675 -
Mtr2g3777 643 Gene3D Transferase(Phosphotransferase) domain 1 419 630 - -
Mtr2g3777 643 SUPERFAMILY Protein kinase-like (PK-like) 346 617 IPR011009 -
Mtr2g3777 643 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3777 643 Coils Coil 600 620 - -
Mtr2g3777 643 Pfam Leucine rich repeat N-terminal domain 5 49 IPR013210 -
Mtr2g3777 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 625 - -
Mtr2g3777 643 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 4 625 - -
Mtr2g3777 643 Gene3D Ribonuclease Inhibitor 1 95 IPR032675 -
Mtr2g3777 643 Gene3D Phosphorylase Kinase; domain 1 309 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3777 Mtr-Chr2 51867184 51869200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3777 6 619 Receptor kinase-like Gene Family AT1G50610 48.976 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr2g3777 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3777 - - gmx:100801053 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3777 2 51867184 51869200 Mtr2g3777 2 51867184 51869200 ECH