Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3775 ATGAAGACTACTACAGGTTCCACATCTCATGGTTCATCCTCATCCTCCAATGGTCTCCTCACCGTCACCATTGCTAGCAGCACTCACCCTCACGGCCCCGCTGCCAACGACGATGACGATGACCTCCTCGTTGATCCTGACGATCCTTTTGATATTACACAAACCAAAAATGCTCCTCCCGAGACCCTCAAGCGTTGGCGACAAGCAGCATTTGTTCTCAATGCGTCGAGGCGTTTTAGATATACTCTCGACTTGAAAAAGGAAGAGGAGAAAGAACAAAAGAAAAGCATGATTAGAGCTCATGCACAAGTCATCAGAGCTGCTTTGCTTTTCAGAATGGCCGGTGAACGCGAACTAGTAACAGGTACATCAGTGGCTTCCACAATAACTCCAGGTGGTGACTATGAAGTTGGACTCGAACAACTTGTTTCAATGTCCAAGAATCAAAACATTTCAACTTTACAACAATATGGAGGGGTTAAAGGCTTATCAGGTTTTCTAAAGTCAGATTTGAATAAAGGGATTAGTGGAGATGACGATGATCTATCAAAGAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAGGGTAGAAGTCTTTGGAGGTTTCTATGGGAAGCTTGGCAGGATCTGACCCTTATAATATTGATTATAGCAGCTGTGGTATCATTAGTGCTTGGAGTATTTGAAAAGGGTTGGGAAAAAGGATGGTTGGATGGAGGAAGCATTGCTTTTGCAGTTTTACTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTTCAGTTTCAGAACTTGAATGCAGAAAAACAAAATATACAATTGGAGGCCATAAGAGGTGGCAGAACAATAAAAATATCGATATTTGAAATTGTCGTTGGTGATGTACTGCCCCTTAAAATAGGAGATCAGGTTCCTGCTGACGGAGTTTTAATTACTGGTCACTCACTTGCCATTGATGAATCCAGCATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAAAGCACCATTTTTTATGTCAGGCTGCAAAGTAGCAGACGGAGTTGGTTCTATGCTGGTAACTAGTGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAACTATCTCAGAGGACACTGGAGAAGAGACTCCACTACAGGTACGATTGAATGGAGTAGCAACTTTTGTTGGTATTGTTGGGCTTACTGTAGCTATTGCTGTTCTTGTAATTCTCTTGGGAAGATACTTTTCTGGCCATACAACGGGTTCAGATGGAAAAGTGCAATTTGTTTATAAGGTGACTAAGATTGACAAAGTTTTAGAAGGGTTCATCGCAATTTTTACCATTGCTGTAACAATTGTGGTTGTCGCAGTGCCAGAAGGTTTACCTTTAGCAGTTACCTTAACCCTGGCATACTCGATGCGGAAGATGATGGCAGACAAAGCTTTGGTGCGAAGGCTATCAGCCTGCGAAACCATGGGCTCTGCTACGACAATTTGCAGTGATAAAACTGGAACTTTGACCTTAAACCAGATGACTGTAGTTGAGGCATATGCTGGTGGGAGGGAGAAATTAAATCCACCAGATGACTCGTCAAAATTGCATCCAGAAGTTTTATCTCTGATAAATGAAGGCATAGCACAAAATACAACAGGCAATATTTTCATTCCTAAGGATGGTGGAGAGACAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTATCTTGGGCAGTGAAGTTGGGAATGAATTTTGAACTTGTCAGATCAAGATCAAAGATTCTCCATGTCTTCCCCTTTAATTCTGAGAAAAAACGAGGTGGTGTTGCTGTGAAACTGGCGGACTCTGAAGTGCATATACATTGGAAAGGTGCTGCTGAGATAGTTCTAGGAACATGTACCCAATATCTTGATTCAAATGGTCAACGACAATCTATTGAAGAAGAGAAGGCATTCTTCAGAAAGGCAATTGATGACATGGCTGCCCAGAGCTTGCGTTGTATTGCTATTGCATACAGATCATACGAATTGGAAAAAATTCCATCCAAGGAAGAGGATTTAGACCAGTGGTCCTTACCCGATCATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAAGAGGCTGTGAGATTATGCACTGAGGCTGGTGTTAAGGTACGCATGGTTACTGGGGATAATCTTCAAACAGCAAAAGCAATATCTTTGGAGTGCGGAATACTGGTTTCAGTTGAAGATGCAGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGTGAACTCTCTGAAAAGGAAAGGGAACAAGTTGCTAAGAAAATAACTGTGATGGGAAGATCATCTCCAAATGACAAGCTTTTGCTCGTGCAAGCACTGAAAAAAGGAGGTGAAGTTGTTGCCGTCACAGGAGATGGCACTAATGATGCCCCTGCTCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTGCATCAGTAGTGAAGGTTGTTCGTTGGGGACGTTCTGTTTATGCAAATATTCAGAAATTTATTCAGTTCCAGCTCACTGTAAATGTTGCTGCTCTTACTATCAATGTCGTGGCAGCTATATCTTCTGGTGGTGTTCCTTTAACCGCAGTACAGCTTCTGTGGGTCAACCTTATTATGGACACACTTGGGGCTCTTGCTCTGGCTACTGAACCACCAACTGACAGCCTTATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTTATAACAAATATCATGTGGAGGAACTTGCTTGTACAGGCTATTTATCAAGTGACTGTTCTTCTGGTTCTTAACTTTGCTGGTGACAGTTTTCTACAAGAGGAATCTGAGACAGATACCTTAACATTGAAGAATACTATAATTTTCAACGCATTCGTCATGTGCCAAATATTCAATGAATTCAATGCTCGAAAGCCAGAAGGGATGAATGTCTTCAAGGGAGTGACTCAGAACCGTCTCTTTGTCGGAATTGTGGGAATGACTTTTGTACTTCAGATAATCATCATCGAGTTCCTTGGGAAGTTTGCAACAACAGTGAAGCTGAATTGGCAGCAGTGGCTTGCTTGTGTTTGTATTGGGCTGGTCAGCTGGCCACTTGCGGTAATTGGAAAATTAATTCCAGTTCCCAAAACACCAATGTCGCGATCCATCTTGAGGGCGTTTAGGCGCTTGAAGAAGTCTCGTACTGCATAA 3279 0.4227 MKTTTGSTSHGSSSSSNGLLTVTIASSTHPHGPAANDDDDDLLVDPDDPFDITQTKNAPPETLKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRMAGERELVTGTSVASTITPGGDYEVGLEQLVSMSKNQNISTLQQYGGVKGLSGFLKSDLNKGISGDDDDLSKRKNAFGTNTYPRKKGRSLWRFLWEAWQDLTLIILIIAAVVSLVLGVFEKGWEKGWLDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEAIRGGRTIKISIFEIVVGDVLPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKAPFFMSGCKVADGVGSMLVTSVGINTEWGLLMATISEDTGEETPLQVRLNGVATFVGIVGLTVAIAVLVILLGRYFSGHTTGSDGKVQFVYKVTKIDKVLEGFIAIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGGREKLNPPDDSSKLHPEVLSLINEGIAQNTTGNIFIPKDGGETEISGSPTEKAILSWAVKLGMNFELVRSRSKILHVFPFNSEKKRGGVAVKLADSEVHIHWKGAAEIVLGTCTQYLDSNGQRQSIEEEKAFFRKAIDDMAAQSLRCIAIAYRSYELEKIPSKEEDLDQWSLPDHELVLLAIVGIKDPCRPGVKEAVRLCTEAGVKVRMVTGDNLQTAKAISLECGILVSVEDAVEPNIIEGKTFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALKKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALTINVVAAISSGGVPLTAVQLLWVNLIMDTLGALALATEPPTDSLMHRSPVGRREPLITNIMWRNLLVQAIYQVTVLLVLNFAGDSFLQEESETDTLTLKNTIIFNAFVMCQIFNEFNARKPEGMNVFKGVTQNRLFVGIVGMTFVLQIIIIEFLGKFATTVKLNWQQWLACVCIGLVSWPLAVIGKLIPVPKTPMSRSILRAFRRLKKSRTA* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3775 1092 CDD P-type_ATPase_Ca_PMCA-like 182 941 - -
Mtr2g3775 1092 Gene3D - 179 376 - -
Mtr2g3775 1092 PANTHER CALCIUM-TRANSPORTING ATPASE 33 1079 - -
Mtr2g3775 1092 Gene3D - 208 1062 - -
Mtr2g3775 1092 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 705 IPR023299 GO:0000166
Mtr2g3775 1092 SFLD p-type atpase 482 860 IPR044492 -
Mtr2g3775 1092 Pfam haloacid dehalogenase-like hydrolase 497 822 - -
Mtr2g3775 1092 PRINTS Sodium/potassium-transporting ATPase signature 243 263 - -
Mtr2g3775 1092 PRINTS Sodium/potassium-transporting ATPase signature 493 514 - -
Mtr2g3775 1092 PRINTS Sodium/potassium-transporting ATPase signature 620 638 - -
Mtr2g3775 1092 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 440 531 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g3775 1092 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 774 890 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g3775 1092 Pfam Cation transporting ATPase, C-terminus 893 1068 IPR006068 -
Mtr2g3775 1092 SMART Cation_ATPase_N_a_2 159 230 IPR004014 -
Mtr2g3775 1092 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 145 1070 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mtr2g3775 1092 PRINTS P-type cation-transporting ATPase superfamily signature 324 338 - -
Mtr2g3775 1092 PRINTS P-type cation-transporting ATPase superfamily signature 500 514 - -
Mtr2g3775 1092 PRINTS P-type cation-transporting ATPase superfamily signature 701 712 - -
Mtr2g3775 1092 PRINTS P-type cation-transporting ATPase superfamily signature 723 733 - -
Mtr2g3775 1092 PRINTS P-type cation-transporting ATPase superfamily signature 808 827 - -
Mtr2g3775 1092 PRINTS P-type cation-transporting ATPase superfamily signature 832 844 - -
Mtr2g3775 1092 Pfam Cation transporter/ATPase, N-terminus 158 225 IPR004014 -
Mtr2g3775 1092 ProSitePatterns E1-E2 ATPases phosphorylation site. 502 508 IPR018303 -
Mtr2g3775 1092 MobiDBLite consensus disorder prediction 1 30 - -
Mtr2g3775 1092 Pfam E1-E2 ATPase 278 478 - -
Mtr2g3775 1092 SUPERFAMILY Calcium ATPase, transduction domain A 279 373 IPR008250 -
Mtr2g3775 1092 SUPERFAMILY Calcium ATPase, transmembrane domain M 157 1070 IPR023298 -
Mtr2g3775 1092 PANTHER CATION TRANSPORTING ATPASE 33 1079 - -
Mtr2g3775 1092 SUPERFAMILY HAD-like 498 913 IPR036412 -
Mtr2g3775 1092 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 90 IPR024750 GO:0005516
Mtr2g3775 1092 MobiDBLite consensus disorder prediction 1 59 - -
Mtr2g3775 1092 Gene3D - 60 113 - -
Mtr2g3775 1092 Gene3D - 510 708 IPR023299 GO:0000166
Mtr2g3775 1092 Gene3D - 497 853 IPR023214 -
Mtr2g3775 1092 SFLD Haloacid Dehalogenase 482 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3775 Mtr-Chr2 51826494 51845301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3775 12 1092 Primary Pumps ATPases AT3G21180 75.298 0.0 1639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3775 K01537 - gmx:100817367 1737.62