Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3772 ATGGGTTCTGCATCTGCTGGGGACAAGATGGACGCTGATTTCGATGAAGAGACACCTTTCAGTTCAACTTCACCTTCATCTACATCTGCTAATACTTCTTCTTCTGTTAAACCACACTCTTTTCATTTCGATTCTTCTTCTTTACCTAAATCATCTTCTCCTTCTTTCTTTAATCATTCCCGCACTAGACTAATCAGCAAAAGTATATATATCGTCTTAATCAAAGCTAAGATCAACATCTTACTCCCCTTTGGTCCTTTTGCCATCTTCCTACACTATTTCTCTGGCGGAAAACATGTTTGGGTCTTTTTCTTCGCCTTATTGGGTATTGCTCCTTTGGCTGAACGTCTAGGTTATGCTACCGAGCAACTTGCTTTCTACACCGGACCAACACTTGGGGGTTTACTTAATGCAACATTTGGAAATGCAACTGAAATGATTATATCTATATACGCTTTGAAAAGCGATATGATTCGTGTTGTTCAGCAATCTTTACTTGGTTCCATCTTGTCCAATATGCTTCTTGTCCTTGGATGTGCATTCTTTACTGGTGGTATTGTTCACTACAATAAACTTCAGGTTTTCAATAAGGCAGCTGCTGTTGTCAACTCAGGCTTGTTGTTGATGGCTGTAATGGGAATACTATTTCCAGCCGTGCTTCATTTCACTCACTCCGAAGTTCATCTTGGGAAGTCCGTTTTATCTCTATCAAGATTTAGCAGCTGTATAATGCTAGTCGCCTATGCAAGCTACCTTTACTTTCAACTTAGAAGTCAACAAAATTTTTATGCTCCAGTTGACCAGGAAGTAGATACAAGTGAAAACTCTGACGAGGAGGAAGAACTTGAGTTAACTCAATCGGAAGCGATAATTTGGCTTGCAATTTTGACGGTATGGGTATCAGTGTTGTCTGGATACCTTGTGGATGCCATAGAGGGAGCATCTGAATCATTGAATATGTCAGTGGCTTTTATTAGCGTCATCTTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCTGTAAAGGACAAGCTAGATATCACAATTGGAGTTGCTGTTGGATCATCAACCCAGATATCGATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTCCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGATGACTAA 1329 0.4003 MGSASAGDKMDADFDEETPFSSTSPSSTSANTSSSVKPHSFHFDSSSLPKSSSPSFFNHSRTRLISKSIYIVLIKAKINILLPFGPFAIFLHYFSGGKHVWVFFFALLGIAPLAERLGYATEQLAFYTGPTLGGLLNATFGNATEMIISIYALKSDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYNKLQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLVAYASYLYFQLRSQQNFYAPVDQEVDTSENSDEEEELELTQSEAIIWLAILTVWVSVLSGYLVDAIEGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGDD* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3772 442 TIGRFAM caca2: calcium/proton exchanger 71 432 - -
Mtr2g3772 442 TIGRFAM cax: calcium/proton exchanger 81 432 IPR004798 GO:0006816|GO:0015369
Mtr2g3772 442 MobiDBLite consensus disorder prediction 17 36 - -
Mtr2g3772 442 MobiDBLite consensus disorder prediction 1 36 - -
Mtr2g3772 442 Pfam Sodium/calcium exchanger protein 290 429 IPR004837 GO:0016021|GO:0055085
Mtr2g3772 442 Pfam Sodium/calcium exchanger protein 99 256 IPR004837 GO:0016021|GO:0055085
Mtr2g3772 442 Gene3D - 130 433 IPR044880 -
Mtr2g3772 442 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 439 IPR004713 GO:0006812|GO:0008324|GO:0016021
Mtr2g3772 442 PANTHER VACUOLAR CATION/PROTON EXCHANGER 6 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3772 Mtr-Chr2 51800975 51808570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3772 14 437 Antiporters AT3G13320 67.213 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3772 K07300 - gmx:100806000 657.136