Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3771 ATGGCATCATCTAAACAAGAAACAAAGGAAATAATATTCAAGTCGAAACTACCAGACATATACATCCCAAACCATCTACCGCTTCATTCATATTGTTTTGAAAATCTCTCCCAATTCGGTTCACGTCCATGTCTCATCAATGCCCCCACCGGAAAGGTCTACACCTACCACGACGTCCAACTCACCTCCCGTAAAGTTGCCTCTGGTCTTCACAAATTGGGACTCCAACAAGGTGAAGTCATCATGATCCTCCTTCCCAATTCCCCTGAATTCGTCTTCTCCTTTCTTGCTGCTTCTTATCTCGGCGCTGTAGCCACTGCAGCCAATCCTTTCTTCACGGCTTCTGAGATTGGAAAGCAAGCAAAATCCTCCAACACCAAGCTTATCATAACACAACAATGTTACTATGACAAAGTCAAAGATTTGTTGAACAACAATGATCATAAGGTTGTGTTGGTAGACTCTTCCATAGATGATAATAACAATGATCATGTCCATTTCTCAACGCTGATCATCCAAGAAGCAGATGAGAATGATCATCTTCCTGATGCAAAGATCCAGCCAGACGATGTTGTTGCGCTGCCATATTCATCAGGAACAACAGGTCTACCAAAGGTTATGTTAACACACAAAGGTTTGGTGAGTAGCATTGCACAGCAAGTAGATGGAGAGAATCCAAATCTATATTACAGAAGTGAAGATGTGATACTTTGTGTGCTTCCTCTGTTTCATATTTATTCACTAAACTCTGTTTTGCTCTGTGGACTCAGAGCCAAAGCTACCATTCTCTTGATGCCAAAATTCGATATAAATTCATTCTTGAATCTTGTTAACAAACATGGAGTAACAGTTGCACCTGTTGTTCCTCCTATTGTATTGGCAATAGCAAAATCACCAGATCTTAATAAGTATGATCTATCTTCAATTAGGATATTAAAATCAGGTGGTGCTCCACTTGGTAAAGAACTTGAAGACACTGTTAGAACTAAATTTCCAAACGCAATTCTTGGACAGGGATACGGAATGACTGAGGCAGGGCCAGTGTTAACGATGAGTTTAGCATTTGCTAAAGAACCATTGAATGTAAAAGCAGGTGCATGTGGAACCGTTGTAAGAAATGCAGAGATGAAGATTGTGGATCCTGACACTGGTAAATCTTTACCTCGAAACCAATCTGGTGAAATCTGCATAAGAGGCGACCAAATTATGAAAGGTTATCTAAATGATCTGGAGGCAACAGAGAGAACCATAGACAAAGAAGGTTGGTTGTATACAGGTGATATTGGGTATATTGATGAAGATGATGAGTTATTCATTGTTGATAGATTGAAGGAATTAATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCTCTTCTTCTGTCTCATCCCAAAATTTCTGATGCTGCTGTTGTCCCAATGAAGGATGAAGCGGCTGGAGAGGTACCTGTTGCATTTGTGGTGAGATCAAATGGTTACACTGACTTAACTCAAGATGAAATTAAGCACTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAATCAAGTATTCTTCATTGATGCAATTCCCAAGTCACCATCAGGCAAAATCTTGCGCAAGGATTTGAGAGCAAAGCTAGCAGCAGGTGTTCCACATTGA 1653 0.4005 MASSKQETKEIIFKSKLPDIYIPNHLPLHSYCFENLSQFGSRPCLINAPTGKVYTYHDVQLTSRKVASGLHKLGLQQGEVIMILLPNSPEFVFSFLAASYLGAVATAANPFFTASEIGKQAKSSNTKLIITQQCYYDKVKDLLNNNDHKVVLVDSSIDDNNNDHVHFSTLIIQEADENDHLPDAKIQPDDVVALPYSSGTTGLPKVMLTHKGLVSSIAQQVDGENPNLYYRSEDVILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFDINSFLNLVNKHGVTVAPVVPPIVLAIAKSPDLNKYDLSSIRILKSGGAPLGKELEDTVRTKFPNAILGQGYGMTEAGPVLTMSLAFAKEPLNVKAGACGTVVRNAEMKIVDPDTGKSLPRNQSGEICIRGDQIMKGYLNDLEATERTIDKEGWLYTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGYTDLTQDEIKHFISKQVVFYKRINQVFFIDAIPKSPSGKILRKDLRAKLAAGVPH* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3771 550 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 546 - -
Mtr2g3771 550 Pfam AMP-binding enzyme 34 449 IPR000873 -
Mtr2g3771 550 Gene3D - 445 546 IPR045851 -
Mtr2g3771 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 546 - -
Mtr2g3771 550 CDD 4CL 22 540 - -
Mtr2g3771 550 Gene3D - 10 444 IPR042099 -
Mtr2g3771 550 Pfam AMP-binding enzyme C-terminal domain 458 534 IPR025110 -
Mtr2g3771 550 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Mtr2g3771 550 SUPERFAMILY Acetyl-CoA synthetase-like 16 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3771 Mtr-Chr2 51765174 51769987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3771 4 512 Monolignol Biosynthesis Gene Families AT1G51680 69.126 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3771 K01904 - gmx:547944 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3771 2 51765174 51769987 Mtr2g3771 2 51765174 51769987 ECH