Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3770 ATGGATGCAGCAGCAGTGTTAGTGTTGGGGATCTTGTTCTTTAAAGCATTCTGTTCCAATGGTACAATTAATATTATCGTATCCAAGGATGCAGGGAGTGGAGATTATACAAGTGTGGGTGAAGCTATCAGAAATGCCCCTGATTGGAGTCACCAACCTTACATCGTTCACGTTTTAGCAGGCATTTATGAAGAATACATCTTCATTCCACCGAGTAAGATTAATATTAAGCTCCTAGGTCATGGTTCAAACCACACAATACTTGTTGCTCACCAAAATGGTTCCACCATAGACATTCGTGGAGAAGGGTTCATGGCTCAAAACATTGGATTTGTGAACACAGCGGAGCTAGATGCAAGCGCTGCAGTGGCCGTTCGGAACGAAGCAAACAACAGCATATTCTTCCAATGCTCCATCCAAGGATTCCAAGACACCTTGTGGGCTGTTTCCGGTAGACAATTCTACAAAAACTGTGAAATATACGGCACTGTCGACTTCATCTACGGCAACGCTGCCGCTGTATTTCAAGACTGCATGGTTTATGCACGCTATAGACAGTTTGTGACATTCACCGCACAGTCACGTGAAAGTCCATATGAAAAAACAGGTTTCACATTCCAACGTTGTAAATTCACAATGTCACCTGAAGATGAGAAGAGAAAGTCAGAGGTGCATGCAACATTAGGTCGTCCTTGGAGGGCATATTCAACAGTTGCTATATTGCATTGTTTCATAGATTCAATGGTTGATCCAAGAGGTTGGGAAGGGATGTCAGGTCTGGCCACTGATAAAGTTACTTATGTTGAGTTTGAGAATGTTGGACCTGGATCAAACACTGATGGTAGAGTGGATTGGCCAGGTGTTACAGTTCTTCGCAACCCAAACAAAGCACTCCCTTTCACTGCTTCCTATCTCTTGGATGCTGACTCTTGGATTCCCTCTACAGGTGTTCCCTATCATAGTGGACTGTAA 972 0.4362 MDAAAVLVLGILFFKAFCSNGTINIIVSKDAGSGDYTSVGEAIRNAPDWSHQPYIVHVLAGIYEEYIFIPPSKINIKLLGHGSNHTILVAHQNGSTIDIRGEGFMAQNIGFVNTAELDASAAVAVRNEANNSIFFQCSIQGFQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMVYARYRQFVTFTAQSRESPYEKTGFTFQRCKFTMSPEDEKRKSEVHATLGRPWRAYSTVAILHCFIDSMVDPRGWEGMSGLATDKVTYVEFENVGPGSNTDGRVDWPGVTVLRNPNKALPFTASYLLDADSWIPSTGVPYHSGL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3770 323 PANTHER PECTINESTERASE 4 322 - -
Mtr2g3770 323 SUPERFAMILY Pectin lyase-like 23 322 IPR011050 -
Mtr2g3770 323 PANTHER PECTINESTERASE 4 322 - -
Mtr2g3770 323 Gene3D - 22 323 IPR012334 -
Mtr2g3770 323 Pfam Pectinesterase 24 308 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3770 Mtr-Chr2 51758091 51763923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3770 12 323 Carbohydrate Esterase AT4G03930 40.367 1.46e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3770 K01051 - gmx:102665195 437.958