Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3765 ATGAAGAAAAACCAAAACCAAACCCTTGGTCGTATGTTTTCAAATCCCCTCAGCGAGATTGATACCAACGTTGAGCTGAGGCATACTCGTAGCTGTAGCAACACTTGTCTCTATGTAGCCGACAACAAGAACAAGAACAAGAACAAGGAAAATGCCGCCAATGTTGTTTCTCTTCCAAAATCCAACTCATTACAGTTGTGCATGCAAATCAACTCTGATTCTTCCCACTTTTCAAGCTCTTTGAAAATTTGGGACCACTCCGACTCTGAAGCTGCTCCTGCTTCCTCCTGGTCTACTTTACCCAACAAGTCTTTGATATGTAGAACATTGCCTATAGATATTGGAAGGTGTACTTGTGTTATTGTTAAGGAACCAACACCTCAGGGTCTCTCTCGCTCTGCTGCCAATTTCTTCTCTCTTTATACATATGAAGGTCATGGACGACAGAATAGGAAATTGGCTGTTGCCCACCACAAGCGCCGTAGTGGGAGGTCTCACTTCACAGTTGCTCAAAATCTCAAAGGACTACTCTCCAATTCTCATGATGATGATACTTTTCTCGGGACAGTAACCTCAAACCTCACCGGCTCAAAATACCACATTTGGGATCAGGGATATCATCGCCATAAGCCCCGTAGTAAACCACCTCTTGCTGTTGTTGAGTATGTACCTACAATAGCAACATGTACTGGAACTCACAGAACCATCAAAGCTTATATACCAAACCATCAATCTATGTCTTTCAAGAACACCAACCAGGTACAACACATTAAGGGACTGCCAATGAATTGGGAGGGAAAAATGGACAAAGTGCATCAACTATTCTCAAGGGATCCACTCTATAACAAGAGTACAAAGCAATTTGAGCTTGACTATAGAGATAAAGGAAGGCCAGGACTTGGAATCCAGAGATCCGTGAAAAACTTTCAGCTCACTTTAGAGGAGAATGGGAAGCAGACAATCCTGCAGCTAGGGAGGGTAGGAAAATCTAATTTTGTTATGGACTACAGATATCCTTTGACTGGTTACCAGGCGTTTTGCATATGTTTGGCTTCCATTGATGCAAAGCTTTGTTGCATAGTGTAG 1086 0.4263 MKKNQNQTLGRMFSNPLSEIDTNVELRHTRSCSNTCLYVADNKNKNKNKENAANVVSLPKSNSLQLCMQINSDSSHFSSSLKIWDHSDSEAAPASSWSTLPNKSLICRTLPIDIGRCTCVIVKEPTPQGLSRSAANFFSLYTYEGHGRQNRKLAVAHHKRRSGRSHFTVAQNLKGLLSNSHDDDTFLGTVTSNLTGSKYHIWDQGYHRHKPRSKPPLAVVEYVPTIATCTGTHRTIKAYIPNHQSMSFKNTNQVQHIKGLPMNWEGKMDKVHQLFSRDPLYNKSTKQFELDYRDKGRPGLGIQRSVKNFQLTLEENGKQTILQLGRVGKSNFVMDYRYPLTGYQAFCICLASIDAKLCCIV* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3765 361 Pfam Tub family 111 354 IPR000007 -
Mtr2g3765 361 PANTHER TUBBY-LIKE PROTEIN 8 40 359 - -
Mtr2g3765 361 SUPERFAMILY Tubby C-terminal domain-like 94 359 IPR025659 -
Mtr2g3765 361 PRINTS Tubby superfamily signature 121 137 IPR000007 -
Mtr2g3765 361 PRINTS Tubby superfamily signature 297 313 IPR000007 -
Mtr2g3765 361 PRINTS Tubby superfamily signature 317 336 IPR000007 -
Mtr2g3765 361 PRINTS Tubby superfamily signature 338 360 IPR000007 -
Mtr2g3765 361 Gene3D Tubby Protein; Chain A 99 360 IPR025659 -
Mtr2g3765 361 PANTHER TUBBY-RELATED 40 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3765 Mtr-Chr2 51693709 51695769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3765 60 254 TUB Transcription Factor Family AT1G16070 53.555 4.25e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mtr2g3765 Tub 4.1e-38 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3765 K19600 - gmx:100803500 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3765 2 51693709 51695769 Mtr2g3765 2 51693709 51695769 ECH