Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3764 ATGTGTGGTGGTGCAATTATCTCCGACTTCATCTCAACTGCGGCGGTGGTGGGTGGTTCCCGCCGTGTCACCGCCGACATGTTGTGGCCCAATTTGAGGAAATCCAGTTCCAGAAAACCGTTTTTCCTTGACAATGACTTCGAAGCTGAGTTCAGAGAGTTTAAGGATGATTCTGATTTGGATGATGATGATGAAGGGTTGTTGGTCGGTGCCAAATGTTTTACCTTTGGTTCAACTAACAACAAATCTTCCAACTCCTTTGTTCGTGGATCAAGTGCTGCAAAAGTTGTTGCATCGAAATCAAACGAGCAAGGTGAAAAGGAATTGAAGAGAAAGAGGAAGAATCAGTATAGGGGTATCCGCCAACGTCCATGGGGAAAATGGGCAGCTGAGATCCGTGACCCGAGAAAAGGAGTTCGTGTTTGGCTCGGAACTTTCAACACTGCTGAAGAAGCTGCAAGAGCCTACGATGCTGAAGCTAGGAGAATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGAAGAGGCTCCAAATGCTTCCTCAAAACGTCTCAAGACAAATTCTGAGACACAGCTGTTGGACAAAAATCTGAACTCTTTCAAGTGTGAAAATATAGAGAACTACTATTCCCCAGTGAATCAGGTGGAACAGAGACCATTGGTTAACGCCCAATGTGCTAATGTCGGACCCTTTGCTGGAAACGGTGTTCAGCTTGCATCTTCTGATGTTACTGCATATTTCAGTTCGGAGTATTCGAGCAATTCATTTGATTATCCTGATCTATGTTGGGGTGAACAAGGCCCGAAAACACCTGAGATTTCATCTGTGTTTTCTGCTCCTATAGAAGGCGAATCTCAGAAGAATCTGCAGTCTGACAACTCGCAGGATATGCTACCTATGCAAAATGATTCAGCAAAGACACACTCTGAGGAGCTTGCAGATATCGAATCCCAGCTGAAGTTCTTTGAGAACTCGTTTGATGATAACTGGAGTGATGCTTCATTGGCAGCTTTGCTTAGTGAAGATACAACTCAGGATTGTGGAAACACAGTGGACCTTTGGAGCTTTGATGACCTGCCTTCCATCGCAGGCGGAGTTTTCTGA 1104 0.4529 MCGGAIISDFISTAAVVGGSRRVTADMLWPNLRKSSSRKPFFLDNDFEAEFREFKDDSDLDDDDEGLLVGAKCFTFGSTNNKSSNSFVRGSSAAKVVASKSNEQGEKELKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPNASSKRLKTNSETQLLDKNLNSFKCENIENYYSPVNQVEQRPLVNAQCANVGPFAGNGVQLASSDVTAYFSSEYSSNSFDYPDLCWGEQGPKTPEISSVFSAPIEGESQKNLQSDNSQDMLPMQNDSAKTHSEELADIESQLKFFENSFDDNWSDASLAALLSEDTTQDCGNTVDLWSFDDLPSIAGGVF* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3764 367 CDD AP2 116 174 IPR001471 GO:0003700|GO:0006355
Mtr2g3764 367 PANTHER DNA-BINDING DOMAIN 1 361 IPR044808 GO:0003700|GO:0009873
Mtr2g3764 367 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Mtr2g3764 367 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Mtr2g3764 367 PANTHER EREBP TRANSCRIPTION FACTOR 1 361 - -
Mtr2g3764 367 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Mtr2g3764 367 SUPERFAMILY DNA-binding domain 116 174 IPR016177 GO:0003677
Mtr2g3764 367 Coils Coil 305 325 - -
Mtr2g3764 367 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Mtr2g3764 367 Gene3D AP2/ERF domain 115 174 IPR036955 GO:0003700|GO:0006355
Mtr2g3764 367 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3764 Mtr-Chr2 51689398 51692070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3764 1 367 AP2-EREBP Transcription Factor Family AT3G14230 42.145 1.21e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr2g3764 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3764 K09286 - gmx:100818646 422.55