Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3749 ATGGATTTTTCATCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCACGCACTAGGGTTCATCAACAAGCTGCTCCTGTAAGTTTCAAGAAATATGAGGTGGAAAACAATTTTTTCTCATTAGGGATGATGAGTATATCTTCTGCAAAAGAAGAGTCAAGTGTTGCCTTGGTGGAGGAGCTGAAACGAGTGAGTGCAGAAAACAAGAAGTTGACAGGAATGTTGACAGAGATGTGTGAGAATTACAACACATTGAGAAACAATTTGATGGAATATATGAGAAAGAATCCTGATCATAAGGAGAAAAGAAAATCTGATGAAATAAGCAGCAGTAACAATCTAATGGGAGGAGGAGTTACTGGAAACAACTCTGAGAGCAGTTCAAGTGATGAAGATCAATCATGCAAGAAACCAAGGCAAATAGTAGAAACTTGCATTAAGGCTAAAGTTTCAAGAGTTTATTTCAAGACAGAATCATCTGATTCAAGCCTTATTGTGAAAGATGGATATCAGTGGAGAAAATATGGACAAAAGGTGACAAGGGATAATCCATCTCCAAGAGCATACTTCAAATGCTCATTTGCTCCAAGCTGCACAGTGAAGAAGAAAGTGCAAAGAAGTGTTGATGATCCATCAGTTGTGGTTGCAACATATGAAGGAGAGCATAACCATCCTCATCCTTCGCAAACCGAGCCAACAAACAATCGTTGTAGGAACCAAATTAGTCCAGTAGCACCTTCTTCTTCTGCACCAAGTACAGTTACACTTGATTGGACAAAGAAAGCACCTTCTTCTGCACCTTCTAAGAATATGATGATAAATAATCCCAAAATGGAAGTACCACAGATTTTGGTGGAACAGATGGCTACTTCATTGACCAAGGATCTTAACTTCAGAGCAGCACTTGCTGCTGCTATATCAGGAAAAATGTTACACCAGAATTAG 951 0.388 MDFSSSWINTSLDLNINPRTRVHQQAAPVSFKKYEVENNFFSLGMMSISSAKEESSVALVEELKRVSAENKKLTGMLTEMCENYNTLRNNLMEYMRKNPDHKEKRKSDEISSSNNLMGGGVTGNNSESSSSDEDQSCKKPRQIVETCIKAKVSRVYFKTESSDSSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCTVKKKVQRSVDDPSVVVATYEGEHNHPHPSQTEPTNNRCRNQISPVAPSSSAPSTVTLDWTKKAPSSAPSKNMMINNPKMEVPQILVEQMATSLTKDLNFRAALAAAISGKMLHQN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3749 316 SMART WRKY_cls 168 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g3749 316 Coils Coil 77 97 - -
Mtr2g3749 316 MobiDBLite consensus disorder prediction 111 131 - -
Mtr2g3749 316 Gene3D WRKY domain 150 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g3749 316 ProSiteProfiles WRKY domain profile. 163 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g3749 316 MobiDBLite consensus disorder prediction 99 138 - -
Mtr2g3749 316 Pfam WRKY DNA -binding domain 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g3749 316 PANTHER TRANSCRIPTION FACTOR 4 316 - -
Mtr2g3749 316 MobiDBLite consensus disorder prediction 229 274 - -
Mtr2g3749 316 MobiDBLite consensus disorder prediction 222 275 - -
Mtr2g3749 316 SUPERFAMILY WRKY DNA-binding domain 166 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g3749 316 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 316 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3749 Mtr-Chr2 51558073 51559395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3749 1 316 WRKY Transcription Factor Family AT1G80840 50.445 7.37e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g3749 WRKY 2.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3749 - - gsj:114388658 377.481