Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3741 ATGGACCTTCTAAGATTAGAGCCATGTTTATCTAATAATTTGAACATCTCATTTTCTGAGAAGAGACAAACAGAAAATGAAGAGAAAAAACATCTTCTACTGGATTTAACTCTTCCTAGTAAAGATTCTTGTGATGATGAGTCAAAACAAGAACTCAATCTCATAAACTGTTTCGATACAGAACCGTCCATGTCGATGAATTCATCATCGGAATCAAATCATGGTAATGAATTAGAGCCAAGGATTTTCTCATGCAACTATTGCCAAAGAAAGTTTTATAGTTCACAGGCACTTGGTGGACACCAAAATGCACACAAAAGAGAAAGAACTATGGCAAAAAGAGGAAACAAATCTGCGGTTTCGCTAGATTTTGAACACAGGTACTCAAGTATGGCTTCTCTACCTTTGCATGGCTCTTATAAAAGATCACCATCATCACTTGGAATTCAGGTGCACTCTTCTATGATTCAAAAACCTTCTTATCAAACACCGTTTTTCGGTTTGTCACGTTACTGTGGTCCAAACCAGTGGCAGAAGCTGCCTATATATTCACAACCAGCATCAAGGAATCTTCATGTTGAGGCAGAAACTGATGGATCATCATCCTTGACTAGTGCCATACCTACAAGATCAGGGAAATTTTCTCCAAGAAAGGTGCAAAATGGATTTGGAGGTTATAATGTTACAAGTTTGAAGAATAAACAAGAGGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 744 0.3777 MDLLRLEPCLSNNLNISFSEKRQTENEEKKHLLLDLTLPSKDSCDDESKQELNLINCFDTEPSMSMNSSSESNHGNELEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTMAKRGNKSAVSLDFEHRYSSMASLPLHGSYKRSPSSLGIQVHSSMIQKPSYQTPFFGLSRYCGPNQWQKLPIYSQPASRNLHVEAETDGSSSLTSAIPTRSGKFSPRKVQNGFGGYNVTSLKNKQEELQKLDLSLKL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3741 247 Gene3D Classic Zinc Finger 61 135 - -
Mtr2g3741 247 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 17 247 IPR044246 GO:0009788
Mtr2g3741 247 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Mtr2g3741 247 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Mtr2g3741 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mtr2g3741 247 MobiDBLite consensus disorder prediction 196 218 - -
Mtr2g3741 247 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3741 Mtr-Chr2 51475504 51477209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3741 13 247 C2H2 Transcription Factor Family AT5G10970 39.526 4.52e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr2g3741 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3741 - - gmx:100812573 251.906