Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3740 ATGTTTTTCTTCCCTTTCCTTAATCACTGTCCATGCATGCTTATGTTCCTCTTGTTTACTTTGTTTTTCACTTCAACAGAAGCTTATGATCCACTTGATCCAAACGGGAATATCACAATAACATGGGACGTTGTAAGCTTGACATCTGACGGTTATGTTGCGGTAGTTACAATAAACAACTTTCAACAATATCGTCATATAACAGCACCCGGATGGTTCGTAGGATGGAGTTGGGTAGAGAAAGAGATCATATGGGCTGTGGTGGGAGGGGAAGCAACTGATCAAGGAGATTGCTCAGAGTTTACGGAAACCTTCCCACATTGTTGTAAGAAGGATCCAACAATTATAGACTTGCACCCTGGAACGCCCTATAATAAACAATTTGCAAATTGCTGCAAAGGTGGTGTACTAAGAACATGGGCACAAGATCCGCCAAATGCAGTTGCAGCGTTTCAAGTCAGTGTCGGTAGAGCTGGCAATAACAAAACTGCCATCATAGCGCCGCAGAATTTCACTTTGAAAACACCAGGACCAGGTTATACATGCAACCAACCAAAAATTGCGGAACTTACTGAATTCACATCACCGAACGAAAGGAGAGTGACTGAAGCAATTTTGACATGGAAGGTGACATGCACATATTCACAATTTCTAGTTCAGAAACCTCCAAATTGCTGCGTTTCCCTCTCATCTTTCTATAGCGAGAATATTGTACCCTGCCCGAACTGTTCATGCGCCTGCCAAGACAACTCATTTCAATCAGGAAGTTGTATAGATTCAAGTAATTCATCGAATTTGGCCTCGATTGTTAACAGCCCTGGAGAGAAAGGTGTTGAGCCTTTAGTTGAATGTACTAGGCATATGTGTCCGATTAAAGTTCACTGGCACATTAAGTATAACTACTATGAGTATTGGCGCGTGAAGATTACCGTTTTTAATTTCAATTACAGAAAGAATTACTCAGACTGGAACGTGGTTGTTCAACATCCAAATTTTGATAAATTGACACAAATTTTCAGTTACAACTACAAATCATTAGCTCCATATGGATCAACAAATGATACTGTAATGCTTTGGGGAGTTAAATTTTTCAATGATGTACTCATGCAAGCTGGTCCTAATGGTAACGTACAGTCGGAGCTACTTTTTCGAAAGAATAAATCAAGTTTTAGTTTCCGTAGCGGCTGGGGTTTTCCGGAGAAGATTTATTTCAACGGTGATGAATGTAGTATGCCACCACCCGACGCTTACCCACGGTTACCTAATGGCTGTTCCACACAAGAGGTTTCTCTCCTTGCTTTGATGATGACCTCGTTCATATTGTTGCTACTTTGCACATATGCTTAG 1347 0.4091 MFFFPFLNHCPCMLMFLLFTLFFTSTEAYDPLDPNGNITITWDVVSLTSDGYVAVVTINNFQQYRHITAPGWFVGWSWVEKEIIWAVVGGEATDQGDCSEFTETFPHCCKKDPTIIDLHPGTPYNKQFANCCKGGVLRTWAQDPPNAVAAFQVSVGRAGNNKTAIIAPQNFTLKTPGPGYTCNQPKIAELTEFTSPNERRVTEAILTWKVTCTYSQFLVQKPPNCCVSLSSFYSENIVPCPNCSCACQDNSFQSGSCIDSSNSSNLASIVNSPGEKGVEPLVECTRHMCPIKVHWHIKYNYYEYWRVKITVFNFNYRKNYSDWNVVVQHPNFDKLTQIFSYNYKSLAPYGSTNDTVMLWGVKFFNDVLMQAGPNGNVQSELLFRKNKSSFSFRSGWGFPEKIYFNGDECSMPPPDAYPRLPNGCSTQEVSLLALMMTSFILLLLCTYA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3740 448 PIRSF COBRA 2 448 IPR006918 GO:0010215|GO:0031225
Mtr2g3740 448 PANTHER PROTEIN COBRA 7 445 IPR006918 GO:0010215|GO:0031225
Mtr2g3740 448 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0031225
Mtr2g3740 448 PANTHER COBRA-LIKE PROTEIN 7 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3740 Mtr-Chr2 51467275 51470185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3740 14 443 COBRA Gene Family AT3G02210 60.417 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3740 - - mtr:MTR_2g104890 913.679