Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3736 ATGAATCTTCTTCTTCTTCTCATTTTTATTTCCTCAACAATTCTTCATGCAAATGCTCAAGCTCAATCTCCAGGAAATCAGGATGTTAGAATAGTGCACCACCGGAATTTGAATAAGAGAATTCTAGTAGGACTAATTGCTTGTTCTGCTCTTCTTGCTGGAATCTTCGTGTTCGTATTGTATATCTTCTTTCGTCGGCATAAAAACTTAACAAGCTCCACTGGTAAAAGTAATGGAATAATAGAGGCTGCAAAAGGGGAAAAGGAAACCTTAAGCGCTGTTAGTGCTAAACTTAACTACTCAAGAATGGCTGATAAGAAGAGTTCAATTGCTATTTTCGACTTTCAGTTGTTAGAGTCTGCAACAAACAGCTTTTCCCAAGATAATATCATGGGAGAGACTGGTTCTATAATTGTTTACAGAGCTCGTTTCGATGAACATTTCCAGGCTGCTGTCAAGAAAGCAGACAGTAATGCTGATAGAGAATTTGAGAATGAAGTGAGTTTGTTGAGCAAGATTCGGCATCAGAATATCATAAAAATCCTAGGCTACTGTATTCAAGGTGAATCGAGGTTTCTTGTTTATGAGTACATGGAGAGTGGTTCTCTGGAATCTCAATTGCACGGGCCTACTCGTGGATCGTCTTTAACTTGGTATATCCGGTTAAGAATTGCGATTGATGTTGCTAGAGCATTAGAATATCTCCACGAGCATTCCAATCCTCCTGTGGTTCATAGAGACTTGAAATCTTCCAATGTTCTTCTGGATTCTGATTTTAATGCCAAGCTATCAGATTTTGGACTTGCTGTAGCATCTGGCGTGCAACACAAGAACATGAAGATGTCGGGAACTTTAGGATATGTGGCACCCGAGTACATATCACATGGTAAACTAACTGATAAGAGCGATGTCTATGCTTTCGGAGTTGTCCTTCTAGAATTACTTACTGGAAGAAAACCAATGCATAATATGTCCTCAGATCAATATCAATCTCTGGTTACATGGGCCATGCCTCAGCTAACCGACAGATCAAAGCTTCCAAGTATTCTAGATCCTGTTATCCAAAATACAATGGATTTGAAGCATTTATATCAGGTAGCTGCAGTGGCTGTGCTATGTGTGCAAGCTGAACCAAGTTATAGGCCACTTATAACAGATGTTCTACACTCTCTCATCCCTTTGGTACCCTTAGAGCTTGGAGGGTCACTCAGAGTTACAGAACCAATCGGCTCAGAAAATCTTCAATGA 1248 0.399 MNLLLLLIFISSTILHANAQAQSPGNQDVRIVHHRNLNKRILVGLIACSALLAGIFVFVLYIFFRRHKNLTSSTGKSNGIIEAAKGEKETLSAVSAKLNYSRMADKKSSIAIFDFQLLESATNSFSQDNIMGETGSIIVYRARFDEHFQAAVKKADSNADREFENEVSLLSKIRHQNIIKILGYCIQGESRFLVYEYMESGSLESQLHGPTRGSSLTWYIRLRIAIDVARALEYLHEHSNPPVVHRDLKSSNVLLDSDFNAKLSDFGLAVASGVQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPMHNMSSDQYQSLVTWAMPQLTDRSKLPSILDPVIQNTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPLELGGSLRVTEPIGSENLQ* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3736 415 Gene3D Phosphorylase Kinase; domain 1 86 197 - -
Mtr2g3736 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Mtr2g3736 415 Gene3D Transferase(Phosphotransferase) domain 1 198 396 - -
Mtr2g3736 415 Pfam Protein tyrosine and serine/threonine kinase 140 358 IPR001245 GO:0004672|GO:0006468
Mtr2g3736 415 SMART serkin_6 125 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3736 415 ProSiteProfiles Protein kinase domain profile. 125 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3736 415 PANTHER RECEPTOR-LIKE KINASE 15 406 - -
Mtr2g3736 415 SUPERFAMILY Protein kinase-like (PK-like) 103 391 IPR011009 -
Mtr2g3736 415 CDD STKc_IRAK 131 394 - -
Mtr2g3736 415 PANTHER OS01G0253100 PROTEIN 15 406 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3736 Mtr-Chr2 51423132 51426878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3736 21 337 Receptor kinase-like Gene Family AT1G80640 46.584 1.10e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mtr2g3736 PK_Tyr_Ser-Thr 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3736 - - gmx:100811188 654.825