Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3732 ATGGAGGAATCATGGGAACACTGGCCTCTTCATTCGGAATTGGGTGATGTAGAGGTTTTGCTAGGGCAATATTGTCATCAAACTAGTGCTGATGATGAAGAAGAGTTCTTGAGAGACATAATCCTTCAGCAACCTGTTACATATTCTGGAAGTATATCATCCTCTAATGAGATGGATGGCTCAGATTGCTCAAAGAAAAAGCTTCATCCTTCATCATCACCGTTCACTCCAAGGACATTCATTCTCTCTTTTGATAAATCTACCATAATACCAGCTACTACTACACCAGAATCAGAAGAAGTGTCAATACCAAAGAGTAGAAGTAATAATAATAAGAGGAGTTTGGAACCAAAAGCAAAAGCTAGTAACCAAACTGGAAAGAAGAGTAGAAGTGGTTCTCAGTATCTGGATCACATTATGGCTGAGAGAAAAAGGAGACTAGAATTATCACAGAAGTTCATTGCACTTTCAGCTACTATTCCTGGCTTAAAGAAGATGGACAAGAACTATATACTTGGTGAAGCAATCAGTTATGTGAAACTACTTCAAGAACGTGTGAAGGAGCTAGAGGATCAAAACAAGAATAGCAAAGAATCAACAATAATTCTCAAGAAAACTGATATGTGTGTAAGTGAAGATACCACCTCAAACTCTGATCAGGATTGCTGCAAATCACCACTCTTTGATGTTAAAGCAAGAATAATGGAAAATGAGGTACTCATTCAGATGCACTGTGAGAAGGAAAATGACATTGAGATCAAAATATATAACGTGCTAGAAAATCTTGATCTCTTTGTCACTGCTAGCAGTGTATTGGCTTTTGGGACTTCAACTCTTGGCTTTACTATTGTCGCTCAGATGGGTGAAGGGTACAAAACGACGGTGAATGATTTGGTGAAAACTCTATGGCAAGTGCTGAATAGCAAAACTGACCCGTTCTAG 942 0.3854 MEESWEHWPLHSELGDVEVLLGQYCHQTSADDEEEFLRDIILQQPVTYSGSISSSNEMDGSDCSKKKLHPSSSPFTPRTFILSFDKSTIIPATTTPESEEVSIPKSRSNNNKRSLEPKAKASNQTGKKSRSGSQYLDHIMAERKRRLELSQKFIALSATIPGLKKMDKNYILGEAISYVKLLQERVKELEDQNKNSKESTIILKKTDMCVSEDTTSNSDQDCCKSPLFDVKARIMENEVLIQMHCEKENDIEIKIYNVLENLDLFVTASSVLAFGTSTLGFTIVAQMGEGYKTTVNDLVKTLWQVLNSKTDPF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3732 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 199 IPR036638 GO:0046983
Mtr2g3732 313 Gene3D - 122 199 IPR036638 GO:0046983
Mtr2g3732 313 MobiDBLite consensus disorder prediction 93 132 - -
Mtr2g3732 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 182 IPR011598 GO:0046983
Mtr2g3732 313 Coils Coil 172 199 - -
Mtr2g3732 313 PANTHER BHLH TRANSCRIPTION FACTOR 1 308 - -
Mtr2g3732 313 Pfam Helix-loop-helix DNA-binding domain 138 183 IPR011598 GO:0046983
Mtr2g3732 313 MobiDBLite consensus disorder prediction 50 73 - -
Mtr2g3732 313 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 308 - -
Mtr2g3732 313 MobiDBLite consensus disorder prediction 93 135 - -
Mtr2g3732 313 SMART finulus 139 188 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3732 Mtr-Chr2 51390210 51395523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3732 111 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.706 3.28e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g3732 HLH 7.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3732 - - cam:101501528 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3732 2 51390210 51395523 Mtr4g0168 4 1978271 1979961 PCT