Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3731 ATGGAGCAGTCATGGGAAAATGTTTGGCCTTTTCAAACGGAAATGGGTGTGGAATATTTGTTAGAGATGTGCCACGAAGAAAAAGAGTTTATTCGTGACTTCATGGCACAGCCGGTAGCTGGAGCTGCCGTTGCCGCCACCGAGAGTAGCAGTGAGATGATTGTAGTCTCTGATGAGTCACCTGAGCTTCTTCCTCCGTCCACATCCTCTAGAGCTTGCATTATCTCTTTAGATAACTCCGCGGCAATACCGTTACCAGCTGTGATGTCCAAATCCAAACCACCACGGTGTCCCACAAAAAAGAGGACTTCTGAGAGAGGAAAAGGAGAAAAGAAGAATATTAAAACTCTAGATCACGCAATGGGAGAGAGGAAAAGAAGACTTGAACTTGCACACAAGTTCATACAGCTTTCCACTATCATTCCTCGCTCAAATAAGACAAACAAAGCTTCTATCGTTGCTGGCGCAACCAATTACGTGGAGCAACTCCAGAAACGAGTGAAGGAGTTAGAAGCACAACAAAACAAGAGAGGCAAAGAACCAATGATACTTTTCAATAAGGAAAATTCTTGTGAAATGAATCTTGACAATTGTTTTAGACCAAATGAATTGCTTCCAGATGTCAAAGTGAAAGTGTCGGAGAATAATATACTCATTTATATCAATTGTGAGAAGGAAAATGGCATTCAACACAAAATATTGGACATGCTTCAAAATCTTCATTTGTTTGTCACCAGCACTAGCGTATTGCCGTTTGGCAATTCAACTCTTGCCATAACTATCATCGCTCAAATGGGTGATGCATACAAAGTGACACAGATGGATTTGGTGGACAACATAAGGCAATTCATGTTGAAAGATGCAACATGA 870 0.4138 MEQSWENVWPFQTEMGVEYLLEMCHEEKEFIRDFMAQPVAGAAVAATESSSEMIVVSDESPELLPPSTSSRACIISLDNSAAIPLPAVMSKSKPPRCPTKKRTSERGKGEKKNIKTLDHAMGERKRRLELAHKFIQLSTIIPRSNKTNKASIVAGATNYVEQLQKRVKELEAQQNKRGKEPMILFNKENSCEMNLDNCFRPNELLPDVKVKVSENNILIYINCEKENGIQHKILDMLQNLHLFVTSTSVLPFGNSTLAITIIAQMGDAYKVTQMDLVDNIRQFMLKDAT* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3731 289 Coils Coil 153 180 - -
Mtr2g3731 289 Pfam Helix-loop-helix DNA-binding domain 119 164 IPR011598 GO:0046983
Mtr2g3731 289 MobiDBLite consensus disorder prediction 98 113 - -
Mtr2g3731 289 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 288 - -
Mtr2g3731 289 SMART finulus 120 169 IPR011598 GO:0046983
Mtr2g3731 289 PANTHER BHLH TRANSCRIPTION FACTOR 1 288 - -
Mtr2g3731 289 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 115 184 IPR036638 GO:0046983
Mtr2g3731 289 MobiDBLite consensus disorder prediction 88 113 - -
Mtr2g3731 289 Gene3D - 115 179 IPR036638 GO:0046983
Mtr2g3731 289 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 163 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3731 Mtr-Chr2 51382593 51385723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3731 118 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.500 1.75e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g3731 HLH 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3731 - - mtr:MTR_2g104530 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0172 4 2053674 2056665 Mtr2g3731 2 51382593 51385723 PCT