Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3723 ATGGAGGAGAATCCATGGGGCAATTGGTCTTATGATTTGGAAATGGAAGAACATTTGTGTCACACAAACAACACATTTGACGAAGAGTTCCTCAGAGATATCCTGTATCAGATTCCACAAGATCAATTCAATGTTCCTATTGCCACAACTGACCTAGTAAACAACTCATCCATCAATGTGTCACAACATGCTGAAGAAATGCCAACCAACTCATTATCAATACCAACAACTGAACAACATCATGATTCTTTGCCTTTGTCATCATCAACAGCTAACCAAGGGTCGAATTCGAAGAAGCCTCGAAACACTTCGGATACACTAGATCACATAATGTCAGAGAGAAATAGGAGACAACTACTTACAAGTAAGATCATAGAACTTTCGGCCTTGATACCTGGATTGAAGAAGATTGATAAGGTTCATGTGGTAACGGAAGCTATCAATTACATGAAACAACTTGAAGAACGTTTGAAAGAGCTAGAAGAAGACATTAAGAAGAAAGATGCAGGATCATTGAGCACCATAACAAGATCTCGTGTTTTAATTGACAAAGACATTGCAATCGGTGAAATGAACACTGAAGAATGTTACGGGAGAAATGAATCACTTCTAGAGGTTGAAGCTAGGATTCTAGAGAAGGAAGTTTTAATCAAGATTTATTGTGGAATGCAAGAAGGGATTGTGGTCAATATAATGTCCCAGCTTCAACTTCTTCATCTGTCCATAACAAGTATCAATGTCTTGCCATTTGGAAATACTCTTGACATCACCATTATTGCCAAGATGGGTGACAAATACAACTTGACAATAAAGGACCTAGTGAAAAAACTAAGAGTAGTGGCTACGTTGCAGATTGTCGGATTAGCTTCGGTTCAGTACAAGTTCAATCAATAA 894 0.3803 MEENPWGNWSYDLEMEEHLCHTNNTFDEEFLRDILYQIPQDQFNVPIATTDLVNNSSINVSQHAEEMPTNSLSIPTTEQHHDSLPLSSSTANQGSNSKKPRNTSDTLDHIMSERNRRQLLTSKIIELSALIPGLKKIDKVHVVTEAINYMKQLEERLKELEEDIKKKDAGSLSTITRSRVLIDKDIAIGEMNTEECYGRNESLLEVEARILEKEVLIKIYCGMQEGIVVNIMSQLQLLHLSITSINVLPFGNTLDITIIAKMGDKYNLTIKDLVKKLRVVATLQIVGLASVQYKFNQ* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3723 297 MobiDBLite consensus disorder prediction 63 108 - -
Mtr2g3723 297 Coils Coil 143 170 - -
Mtr2g3723 297 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 15 285 - -
Mtr2g3723 297 SMART finulus 110 159 IPR011598 GO:0046983
Mtr2g3723 297 Gene3D - 94 168 IPR036638 GO:0046983
Mtr2g3723 297 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 165 IPR036638 GO:0046983
Mtr2g3723 297 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 104 153 IPR011598 GO:0046983
Mtr2g3723 297 Pfam Helix-loop-helix DNA-binding domain 109 154 IPR011598 GO:0046983
Mtr2g3723 297 PANTHER BHLH TRANSCRIPTION FACTOR 15 285 - -
Mtr2g3723 297 MobiDBLite consensus disorder prediction 63 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3723 Mtr-Chr2 51298711 51301289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3723 65 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.991 5.12e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr2g3723 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3723 - - mtr:MTR_8g069740 377.096