Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3713 ATGGCCAAATCTGTAGGTGAAAAAAGGGTTAGGAATAACATACCCAATGATCTTGTATTCTCTATTCTGTCAAAACTTTCTTTAAAATCTTTAAAACGATTTGGATGCGTATGTAAACCATGGACTTTCTTATTTGAAAACTCTTGTTTCCGCACTAATTTTATATCAATTCCTCCCTCTTATTGCAATGATATATCTGTCCTCTTATATGAGGTTGTCGCCCATGATTATTCTATTCATTGCTCTTCCTATTTGCTTTCTGGTGATAGGTATGAGAATCAAGTAAAATTAGACTTTCCAAATCCGTTTCAAGAGGAAAACTCTTTCTTTAATTTTAATACTTGTGATTATTATGGTTGTGACCCTATTACTGGAACTATTTGCCTTTCACAAGGAAAACCATTTGTACTGGGGAACCCAACTACCAATGAATACAAACTCATTCCTCCCAGCTCTCTTCAGGCTGTACCACCTTATAGGGAGCTAGCATCAAAAGATCTTCATGGGTTTGGTTATGACCATATCAAAGATGACTTTAAAATTATTAGATACATGCGATTTACTACAATAAGTGACCAAGAACTTGAACGTCTTGATGTGCGATACGAATATGTTCCATGGAACGAAATATCTTATGAATCTGAATGGGAGATTTATAGCCTAAGGTGTAACTCTTGGAGTAAACTTGATATCAATATGCCTAATCATTGTGAAATTGGTTCATCTCAACTGTTGAACATTGATGGAATGTCTCATTGGTGGTATGAAAGTGAAAATCGTGATAAACATGTTTTAGTTTCATTTGACTTTAGCAACGAGATACTCTTCAATTCATGTCCATTTTATTTTCACACATATCTTATTATGACGACGATACTAAGCGACATGGTTTCAATTAATGATGCTGTTTCCTACATCTTAGTTTCAATAATGATTATACTTCTGATAACTCCACTTGCAATTCCTTTGAAAATGACTCTATTTCCTGCAATTCGAAAAAACAACATTCCATTGGTTGGTTCTTCTGATCTTTCAACAGAAACAAGTCCATTGATAACATCATCATCTTCTTCAGCTGCATATGTTGGAAGTTTTCATGACAATGAGGATGCTTCTTCAGATGTTGAGATACTAATTGCAGAAGGGGAAGGGGCCATTAGGAAGAAAAGGAGACCAAAAAGAGGAGATGATTTTAAGTTCAAAGAAGCTTTAGTTAAGGATGATTTTTGGCTACTTTGGTTTGCTTATTCTTTCGGGGTTGGCTCAGGAGTAACTGTGCTCAATAATTTGGCTCAAATTGGAGCTGCTTTGGGTGTAGAAGATACAACCATATTGCTCTCAATCTTCAGCTTTTGCAATTTTATCGGTCGTCTAGGTGCTGGTGCTGTTTCTGAACACTTTGTTAGCTCTATATGGCACTATGCTGCAACAGCTTTACTTGGGATGTGCTATGGAGTTCAATATTCTATAATGGTCCCAACTGTTTCTGAGCTTTTTGGTTTGAAGCACTTTGGTGTAATAAGTAGCTTCATGATGCTAGGAAATCCAATTGGTGCCCTTCTTTTTTCTGTTGCTGGAAATTTGTATGATACTGAAGCGGCGAAGCAAGGAAACTCCACCTGCTACGGTGCAAATTGTTTCAGAATCACTTTTCTTGTTTTGGCTGGTGTATGTGGAATTGGTACCATTTTGAGTATAATTTTGACAGTTAGAATAAGACCTGTATACCAAATGCTGTATGCCGGCGGTTCGTTTCGTCTGTCTCAAACTTCAAATCAATATAATTGTTCAATGAGGATATAG 1803 0.3638 MAKSVGEKRVRNNIPNDLVFSILSKLSLKSLKRFGCVCKPWTFLFENSCFRTNFISIPPSYCNDISVLLYEVVAHDYSIHCSSYLLSGDRYENQVKLDFPNPFQEENSFFNFNTCDYYGCDPITGTICLSQGKPFVLGNPTTNEYKLIPPSSLQAVPPYRELASKDLHGFGYDHIKDDFKIIRYMRFTTISDQELERLDVRYEYVPWNEISYESEWEIYSLRCNSWSKLDINMPNHCEIGSSQLLNIDGMSHWWYESENRDKHVLVSFDFSNEILFNSCPFYFHTYLIMTTILSDMVSINDAVSYILVSIMIILLITPLAIPLKMTLFPAIRKNNIPLVGSSDLSTETSPLITSSSSSAAYVGSFHDNEDASSDVEILIAEGEGAIRKKRRPKRGDDFKFKEALVKDDFWLLWFAYSFGVGSGVTVLNNLAQIGAALGVEDTTILLSIFSFCNFIGRLGAGAVSEHFVSSIWHYAATALLGMCYGVQYSIMVPTVSELFGLKHFGVISSFMMLGNPIGALLFSVAGNLYDTEAAKQGNSTCYGANCFRITFLVLAGVCGIGTILSIILTVRIRPVYQMLYAGGSFRLSQTSNQYNCSMRI* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3713 600 Pfam F-box domain 13 41 IPR001810 GO:0005515
Mtr2g3713 600 SUPERFAMILY MFS general substrate transporter 387 574 IPR036259 -
Mtr2g3713 600 SUPERFAMILY F-box domain 12 83 IPR036047 GO:0005515
Mtr2g3713 600 SMART fbox_2 14 54 IPR001810 GO:0005515
Mtr2g3713 600 TIGRFAM F_box_assoc_1: F-box protein interaction domain 120 293 IPR017451 -
Mtr2g3713 600 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 474 592 - -
Mtr2g3713 600 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 281 470 - -
Mtr2g3713 600 Gene3D - 12 49 - -
Mtr2g3713 600 Gene3D MFS general substrate transporter like domains 462 576 IPR036259 -
Mtr2g3713 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 281 470 - -
Mtr2g3713 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 474 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3713 Mtr-Chr2 51170527 51173627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3713 283 594 Nodulin-like Gene Family AT1G80530 53.468 3.95e-114 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3713 - - mtr:MTR_2g104250 583.563