Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3696 ATGGCTTTTTGCCCAATTTTTTGTTGCTTAAATGTTTCGGATCGAAAAGGACGTGGGAAGAAACAACCTCCATGGCGAGTGTTTTCTTTGAAGGAATTACACTCAGCTACAAATAACTTCAACTATGATAACAAGCTTGGCGAAGGGGGATTTGGAAGTGTTTACTGGGGTCAGCTTTGGGATGGATCCCAAATTGCAGTCAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGGCTAATTGTATATGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCACGGACAGCACTCGACAGAAAGCCTCCTTGATTGGAATCGACGAATGAATATTGCAATCGGGTCTGCTGAGGGAATTGTATACCTTCACGTCCAAGCAACGCCGCATATCATCCATAGGGATGTTAAAGCAAGCAACGTGTTGCTGGATTCAGATTTTCAAGCGCGTGTTGCTGATTTTGGCTTCGCCAAGTTGATCCCTGATGGAGCAACGCATGTGACAACTCGAGTTAAGGGCACCCTTGGCTATCTTGCACCAGAATATGCTATGTTAGGTAAAGCTAATGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCCTTCTCGAACTTGCCAGCGGCAAAAAACCACTCGAAAAACTAAGTTCTTCAGTGAAACGGGCGATAAATGATTGGGCACTACCATTAGCCTGTGAAAAGAAATTTAGTGAACTTGCGGATCCGAGACTTAATGGTGACTATGTGGAAGAAGAGCTTAAAAGGGTTATTTTAGTTGCTCTAATATGTGCTCAGAATCAGCCTGAGAAGAGACCTACGATGGTCGAGGTGGTAGAACTACTGAAAGGAGAGTCGAAAGAGAAGGTTTTGCAGTTGGAGAATAACGAACTGTTTAAGAACCCCCTTGCTGTAGGAAACACTAATGATGAAATATCAGCTGCTGAAGGGAGTTCTGACTTCATATCAGCGGAGAACGAATCTAAACATGAGATGGAAGAGAATGCAGAACCATGA 1104 0.4312 MAFCPIFCCLNVSDRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGIVYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSSVKRAINDWALPLACEKKFSELADPRLNGDYVEEELKRVILVALICAQNQPEKRPTMVEVVELLKGESKEKVLQLENNELFKNPLAVGNTNDEISAAEGSSDFISAENESKHEMEENAEP* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3696 367 MobiDBLite consensus disorder prediction 343 367 - -
Mtr2g3696 367 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3696 367 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Mtr2g3696 367 PANTHER BNAA05G14800D PROTEIN 1 364 - -
Mtr2g3696 367 ProSiteProfiles Protein kinase domain profile. 40 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3696 367 MobiDBLite consensus disorder prediction 352 367 - -
Mtr2g3696 367 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3696 367 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Mtr2g3696 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mtr2g3696 367 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Mtr2g3696 367 PANTHER OS01G0750732 PROTEIN 1 364 - -
Mtr2g3696 367 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Mtr2g3696 367 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3696 Mtr-Chr2 51029709 51033105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3696 28 314 Trihelix Transcription Factor Family AT1G70460 51.203 5.96e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mtr2g3696 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3696 - - gmx:100788153 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3696 2 51029709 51033105 Mtr2g3696 2 51029709 51033105 ECH
Mtr2g3696 2 51029709 51033105 Mtr4g0199 4 2364791 2365646 PCT