Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3616 ATGGATGACATTGATGATGATGCAATTGCAAGATATCCCTCTAACCAATATGGTGTTGGTTACCCTAACAATCAAGGGTATGGTTATCTGAAACACCCTTTGAGGAATTCTTCATATTCCCATCCAGCTGCAAATGAATCTACCCGAGATTATGATCATGTCGATGATGAAGATCGGTTAGGAGGGAACGATGATGAAGATCGGTTAGGAGGGGACGATGATGAAGATCGGTTAGGAGGGGATGATGATGATGATGATGATGTTGTTGATGAAGACCGGTTAGGAGGGGATGATGATGTTGTTGTTCATGATGATGATGATGATGATCAACATTCCCTAAAGCAGGCTGATGATGATGACTCCGATGGGGGTGGTGATGAAAATGATGATAATGACCGACTAAGTGAGGAATATGGTTATCTGAAAGATTCTGCGAGGAATTCTCCATATTCCCAGCCATTTGTGAATGAAGGTAACAATGATGAGGATGAAGAAGATGAAGAGCGATTGGTGGAGGAAGATGATGATGTTGTTGATATTGATCAAAATAACAATGGTCAGCTTTCCCTAAAGCATGCTGATGAAGAAGATAGTAATGATGAGGATGGGGATAGGGATGAAAATATTGATAACAATGATGGTGGTAATGACAATAAGCAGGAAAGTTATGCCATGATGAATGAAGATGAATTAGAGTGGCGCCCAAAAAAGCAAAAGCTAAAGAGTTTGATGTCAACTTATGAATTTGCAGCTCGGGTGCCGACACCGTCAGCTGCAGCTGCTAAACGATCTTTTGGGGTTAGGAATTCCCTTACTGAATGGACTGAGAAGGAGACATTTGTTCTTCTTGATGCTTGGGGTGATCGGTTTCTGCAACATAGAAGGAAGAGTCTTCGATCTGAGGAATGGCAACAAGTTGCAGAAAAGGTATCAGTAGTTTCAAAAGTTGAAAGAACGGGTACTCAATGTAGAAATCGTTTAGATACATTGAAGAAAAAATACAAAAAGGACAAGATTAAGTTTCAAGATATGGGTGGTGGAGATAGAAAATGGGTTTATTTTCAAAAGATGGATAAACTAATGTCTTCTCCACCACAACAAGCAAGACTCTCCTGTCGTTCGAACTCAAGAGAGCGTATTTTTATGAAGCCTGGAGTTTATGTAAATCATGCAAATGAGATGGATGACATGAAGAAGGATAGTCCTCCTGAAAATACAGAATACGTCCGTGTAGAAGGTTTCGAAGGGCCTCGCCCAAAGAAAAGAAGGAAAGGAAGGGGAAGTGATGAGGCTTCTTCCTTCAAATTACTTGCGGATTCCATTCAGAATTTTGGTAAGATATATGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGATGGAACTAGAAAAGATGAGGATGGATTTCCTCAACGATTTGGAAGCACAAAAGAGACAGATTTTTGAAAGATTGCAGAGTGAGATTTTAAAAATCGAACAAAGAGATGATTAG 1491 0.3984 MDDIDDDAIARYPSNQYGVGYPNNQGYGYLKHPLRNSSYSHPAANESTRDYDHVDDEDRLGGNDDEDRLGGDDDEDRLGGDDDDDDDVVDEDRLGGDDDVVVHDDDDDDQHSLKQADDDDSDGGGDENDDNDRLSEEYGYLKDSARNSPYSQPFVNEGNNDEDEEDEERLVEEDDDVVDIDQNNNGQLSLKHADEEDSNDEDGDRDENIDNNDGGNDNKQESYAMMNEDELEWRPKKQKLKSLMSTYEFAARVPTPSAAAAKRSFGVRNSLTEWTEKETFVLLDAWGDRFLQHRRKSLRSEEWQQVAEKVSVVSKVERTGTQCRNRLDTLKKKYKKDKIKFQDMGGGDRKWVYFQKMDKLMSSPPQQARLSCRSNSRERIFMKPGVYVNHANEMDDMKKDSPPENTEYVRVEGFEGPRPKKRRKGRGSDEASSFKLLADSIQNFGKIYEKIENSKRQQMMELEKMRMDFLNDLEAQKRQIFERLQSEILKIEQRDD* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3616 496 MobiDBLite consensus disorder prediction 158 180 - -
Mtr2g3616 496 MobiDBLite consensus disorder prediction 411 430 - -
Mtr2g3616 496 MobiDBLite consensus disorder prediction 1 229 - -
Mtr2g3616 496 Coils Coil 448 479 - -
Mtr2g3616 496 Gene3D - 274 336 - -
Mtr2g3616 496 MobiDBLite consensus disorder prediction 46 66 - -
Mtr2g3616 496 PANTHER OS01G0718900 PROTEIN 156 496 - -
Mtr2g3616 496 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 156 496 IPR044823 -
Mtr2g3616 496 Pfam Myb/SANT-like DNA-binding domain 273 360 IPR044822 -
Mtr2g3616 496 ProSiteProfiles Myb-like domain profile. 274 331 IPR001005 -
Mtr2g3616 496 MobiDBLite consensus disorder prediction 95 119 - -
Mtr2g3616 496 MobiDBLite consensus disorder prediction 411 432 - -
Mtr2g3616 496 MobiDBLite consensus disorder prediction 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3616 Mtr-Chr2 50110208 50113163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3616 437 494 Trihelix Transcription Factor Family AT3G14180 46.552 6.14e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr2g3616 Myb_DNA-bind_4 3.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3616 - - mtr:MTR_2g102227 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3616 2 50110208 50113163 Mtr2g3616 2 50110208 50113163 ECH