Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3599 ATGGGTAAGGGAACTGGAAGTTTCGGTAAGAGGAGGAACAAGACCCACACACTCTGTGTCAGGTGTGGCCGCCGCAGTTTCCATCTCCAGAAGAGTAGATGCTCCGCTTGTGCTTACCCAGCTGCTCGTGTTAGGAAATATAACTGGAGTGAAAAGGCAATCCGTAGGAAGACTACTGGAACCGGTAGGATGAGGTACTTGCGCAACGTTCCTCGCCGTTTCAAGAGTGGTTTCAGAGAGGGAACTGAAGCTGCACCTAGGAAGAAGGGAGCTGCATCTGCTTAA 285 0.5123 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAASA* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3599 94 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Mtr2g3599 94 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Mtr2g3599 94 PANTHER RIBOSOMAL PROTEIN L37 1 93 - -
Mtr2g3599 94 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Mtr2g3599 94 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Mtr2g3599 94 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Mtr2g3599 94 PANTHER 60S RIBOSOMAL PROTEIN L37 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3599 Mtr-Chr2 49959502 49960373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3599 1 94 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.298 3.13e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3599 K02922 - han:110908531 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3599 2 49959502 49960373 Mtr2g3599 2 49959502 49960373 ECH