Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g3591 | ATGGATAAAGATCATAAGCATGGTTACGAGAAACCCTACGAAGATTCAGAAAAGAGGATGAAAAGGTCTTCTTCTTCACTATCAAGTGATGAAGAAGATGATACTAAGGATGAGGTTTCTATTCAGGAATCTACACATCAATGCAATGTTTGTGGAAAAACTTTTAGCAATGGAAAAGCGTTGGGCGGTCACCGCAGATCTCACTTTCTTAAAAAGAAACTTAATCATCGTTCACAAAAGGTAAAAACCCCTCTCTCAATACAAGGTAGTTATAATAGGGCTAGTTTTGATAAAGATAGTAAGCATGGTTTTGAGAACACCTGTGAAGAGTCGGAAAAGAGGATAAAGAGGTCTTTTAGTTCTCTATCAAGTGATGAAGATGATGCTAAGGATGAGGTTTCTATCCCAGAACACGAATGTAATATCTGTGGAAAAACTTTTAGCAACGGAAAAGCATTGGGTGGCCACCGGAGATCTCACTTTCTTAAGAAGAAACTAAATCATCATCCACAAAAGGTAAAAAGCCCTTTTTCAATACAAGGTAATAATAATAGGGCTAGTTTTGATGATTATGATGATGAAGAAGAAATTGGTGGCATAAAGAAACCGATCAAGAAACCAACTTGTTCTATCTGCGAGAAGAAGTTTCCAACCAAGAATGCTTTGTATGGTCACATGAGGTCTCACCCGAATAGAGATTTTAAAGGACTTAATCCTCCCACTGAATATCATAAAGAAGATCAAGATGATGGTGATTTATCTTTGCCAAAATGGCAGAAGAGAGATAGAAGAGGTAGAAAGTGTATTGGTAGTGTCGAGGCGGCTGCAAATCTTTTGCACCTTCGTTATGACAAGAACTTTTGTGTTGGTGAATCATCATCAAATGGGAATGGCAAGAATGAGCTTGGTGGTGATAGAAACAGCAGTGATAAGCAACTAAAGAAAGGAAAAGGTTTATTTGATTTGAATGAGTCGTATGTTATAGAGGACTAA | 993 | 0.3736 | MDKDHKHGYEKPYEDSEKRMKRSSSSLSSDEEDDTKDEVSIQESTHQCNVCGKTFSNGKALGGHRRSHFLKKKLNHRSQKVKTPLSIQGSYNRASFDKDSKHGFENTCEESEKRIKRSFSSLSSDEDDAKDEVSIPEHECNICGKTFSNGKALGGHRRSHFLKKKLNHHPQKVKSPFSIQGNNNRASFDDYDDEEEIGGIKKPIKKPTCSICEKKFPTKNALYGHMRSHPNRDFKGLNPPTEYHKEDQDDGDLSLPKWQKRDRRGRKCIGSVEAAANLLHLRYDKNFCVGESSSNGNGKNELGGDRNSSDKQLKKGKGLFDLNESYVIED* | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g3591 | 330 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 121 | 243 | IPR044653 | GO:0003700 | |
Mtr2g3591 | 330 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 5 | 73 | IPR044653 | GO:0003700 | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Mtr2g3591 | 330 | SMART | c2h2final6 | 46 | 68 | IPR013087 | - | |
Mtr2g3591 | 330 | SMART | c2h2final6 | 207 | 229 | IPR013087 | - | |
Mtr2g3591 | 330 | SMART | c2h2final6 | 138 | 160 | IPR013087 | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 72 | 110 | - | - | |
Mtr2g3591 | 330 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 140 | 160 | IPR013087 | - | |
Mtr2g3591 | 330 | Gene3D | Classic Zinc Finger | 135 | 229 | - | - | |
Mtr2g3591 | 330 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 138 | 165 | IPR013087 | - | |
Mtr2g3591 | 330 | Pfam | C2H2-type zinc finger | 138 | 160 | - | - | |
Mtr2g3591 | 330 | Pfam | C2H2-type zinc finger | 209 | 230 | - | - | |
Mtr2g3591 | 330 | Pfam | C2H2-type zinc finger | 46 | 68 | - | - | |
Mtr2g3591 | 330 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 48 | 68 | IPR013087 | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 80 | 94 | - | - | |
Mtr2g3591 | 330 | SUPERFAMILY | beta-beta-alpha zinc fingers | 42 | 73 | IPR036236 | - | |
Mtr2g3591 | 330 | SUPERFAMILY | beta-beta-alpha zinc fingers | 138 | 229 | IPR036236 | - | |
Mtr2g3591 | 330 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 209 | 229 | IPR013087 | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 168 | 190 | - | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 226 | 256 | - | - | |
Mtr2g3591 | 330 | PANTHER | ZINC FINGER PROTEIN ZAT4-LIKE | 121 | 243 | - | - | |
Mtr2g3591 | 330 | PANTHER | ZINC FINGER PROTEIN ZAT4-LIKE | 5 | 73 | - | - | |
Mtr2g3591 | 330 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 207 | 234 | IPR013087 | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 223 | 256 | - | - | |
Mtr2g3591 | 330 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 46 | 73 | IPR013087 | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 291 | 316 | - | - | |
Mtr2g3591 | 330 | Gene3D | Classic Zinc Finger | 23 | 105 | - | - | |
Mtr2g3591 | 330 | MobiDBLite | consensus disorder prediction | 95 | 110 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g3591 | Mtr-Chr2 | 49909761 | 49910753 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g3591 | 138 | 240 | C2H2 Transcription Factor Family | AT2G26940 | 36.538 | 1.18e-12 | 65.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mtr2g3591 | zf-C2H2_6 | 2.6e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g3591 | - | - | cam:101497250 | 211.075 |