Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3591 ATGGATAAAGATCATAAGCATGGTTACGAGAAACCCTACGAAGATTCAGAAAAGAGGATGAAAAGGTCTTCTTCTTCACTATCAAGTGATGAAGAAGATGATACTAAGGATGAGGTTTCTATTCAGGAATCTACACATCAATGCAATGTTTGTGGAAAAACTTTTAGCAATGGAAAAGCGTTGGGCGGTCACCGCAGATCTCACTTTCTTAAAAAGAAACTTAATCATCGTTCACAAAAGGTAAAAACCCCTCTCTCAATACAAGGTAGTTATAATAGGGCTAGTTTTGATAAAGATAGTAAGCATGGTTTTGAGAACACCTGTGAAGAGTCGGAAAAGAGGATAAAGAGGTCTTTTAGTTCTCTATCAAGTGATGAAGATGATGCTAAGGATGAGGTTTCTATCCCAGAACACGAATGTAATATCTGTGGAAAAACTTTTAGCAACGGAAAAGCATTGGGTGGCCACCGGAGATCTCACTTTCTTAAGAAGAAACTAAATCATCATCCACAAAAGGTAAAAAGCCCTTTTTCAATACAAGGTAATAATAATAGGGCTAGTTTTGATGATTATGATGATGAAGAAGAAATTGGTGGCATAAAGAAACCGATCAAGAAACCAACTTGTTCTATCTGCGAGAAGAAGTTTCCAACCAAGAATGCTTTGTATGGTCACATGAGGTCTCACCCGAATAGAGATTTTAAAGGACTTAATCCTCCCACTGAATATCATAAAGAAGATCAAGATGATGGTGATTTATCTTTGCCAAAATGGCAGAAGAGAGATAGAAGAGGTAGAAAGTGTATTGGTAGTGTCGAGGCGGCTGCAAATCTTTTGCACCTTCGTTATGACAAGAACTTTTGTGTTGGTGAATCATCATCAAATGGGAATGGCAAGAATGAGCTTGGTGGTGATAGAAACAGCAGTGATAAGCAACTAAAGAAAGGAAAAGGTTTATTTGATTTGAATGAGTCGTATGTTATAGAGGACTAA 993 0.3736 MDKDHKHGYEKPYEDSEKRMKRSSSSLSSDEEDDTKDEVSIQESTHQCNVCGKTFSNGKALGGHRRSHFLKKKLNHRSQKVKTPLSIQGSYNRASFDKDSKHGFENTCEESEKRIKRSFSSLSSDEDDAKDEVSIPEHECNICGKTFSNGKALGGHRRSHFLKKKLNHHPQKVKSPFSIQGNNNRASFDDYDDEEEIGGIKKPIKKPTCSICEKKFPTKNALYGHMRSHPNRDFKGLNPPTEYHKEDQDDGDLSLPKWQKRDRRGRKCIGSVEAAANLLHLRYDKNFCVGESSSNGNGKNELGGDRNSSDKQLKKGKGLFDLNESYVIED* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3591 330 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 121 243 IPR044653 GO:0003700
Mtr2g3591 330 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 5 73 IPR044653 GO:0003700
Mtr2g3591 330 MobiDBLite consensus disorder prediction 1 30 - -
Mtr2g3591 330 SMART c2h2final6 46 68 IPR013087 -
Mtr2g3591 330 SMART c2h2final6 207 229 IPR013087 -
Mtr2g3591 330 SMART c2h2final6 138 160 IPR013087 -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 72 110 - -
Mtr2g3591 330 ProSitePatterns Zinc finger C2H2 type domain signature. 140 160 IPR013087 -
Mtr2g3591 330 Gene3D Classic Zinc Finger 135 229 - -
Mtr2g3591 330 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 165 IPR013087 -
Mtr2g3591 330 Pfam C2H2-type zinc finger 138 160 - -
Mtr2g3591 330 Pfam C2H2-type zinc finger 209 230 - -
Mtr2g3591 330 Pfam C2H2-type zinc finger 46 68 - -
Mtr2g3591 330 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 80 94 - -
Mtr2g3591 330 SUPERFAMILY beta-beta-alpha zinc fingers 42 73 IPR036236 -
Mtr2g3591 330 SUPERFAMILY beta-beta-alpha zinc fingers 138 229 IPR036236 -
Mtr2g3591 330 ProSitePatterns Zinc finger C2H2 type domain signature. 209 229 IPR013087 -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 168 190 - -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 1 46 - -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 226 256 - -
Mtr2g3591 330 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 121 243 - -
Mtr2g3591 330 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 5 73 - -
Mtr2g3591 330 ProSiteProfiles Zinc finger C2H2 type domain profile. 207 234 IPR013087 -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 223 256 - -
Mtr2g3591 330 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 291 316 - -
Mtr2g3591 330 Gene3D Classic Zinc Finger 23 105 - -
Mtr2g3591 330 MobiDBLite consensus disorder prediction 95 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3591 Mtr-Chr2 49909761 49910753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3591 138 240 C2H2 Transcription Factor Family AT2G26940 36.538 1.18e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr2g3591 zf-C2H2_6 2.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3591 - - cam:101497250 211.075