Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3579 ATGATGGCTGGGAACCCTAACTGGTGGAGCATGCATCCATCATCTTTGAATATCCCTCCTCAATATATGCTTGGATCTTCTTCAATCCCTTTCAATTCCTTGACAGAAAATAATGCTGAAGTACCTCCTCAATCATGGAGTCAACTACTTTTTACTGGACTACCTGGAGAAGAAGAGAGACTTGGTTTTAATCATTTTCAACCTAAAAACTCAGAAAACTGGGATGTGCAAATTATGAATCCATCTTCAAGAGTTCCTTTTATGGATATAATAAAGCATGAAGTTTCTCAAGGTGAGAATTTTTATGGCCAACAAGGGCATCATCATGAGGAGTTTCATGCTAACTCTGGATCACTTGGTTCATCTTGGTCACATATGGTGCCAGTTTCTTCTCCAAGCTCTCATATCACTAGCTTAAGTAGTGATAATATATTGGATTTCACTTACAACAAGGTAGATCATAGCAAGAATCAACTACCAGATCAAATATCTGAGTGTAATAGCTCAACCACTGGAGTTAATAAGAAGGCTAGGGTTCAGCCATCTTCAAGCCAACCACCTTTAAAGGTGAGGAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTATTATTAGAAGCCATTGGATACATCAGGTTTCTACAGAGTCAAATTGAGGCACTCAGCACCCCTTACTTGGACACTGCAGCATCAAAAAACATGATGAGGAATCAACATTCTGTACATGTTGAAAGAAATTCTGTATTTCCTGAAGACCCCGGTCAGCTGTTGGATGACACTGGCCTAAAAAGAAAGGGCGCTCCAATTCCAAACCAGAATGCAGAAGGTAATAAGGCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCAGTGTCATGCACACAACATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCAGCATTTGGAAGTGGATTTTAA 990 0.4061 MMAGNPNWWSMHPSSLNIPPQYMLGSSSIPFNSLTENNAEVPPQSWSQLLFTGLPGEEERLGFNHFQPKNSENWDVQIMNPSSRVPFMDIIKHEVSQGENFYGQQGHHHEEFHANSGSLGSSWSHMVPVSSPSSHITSLSSDNILDFTYNKVDHSKNQLPDQISECNSSTTGVNKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSTPYLDTAASKNMMRNQHSVHVERNSVFPEDPGQLLDDTGLKRKGAPIPNQNAEGNKAKDLRSRGLCLVPVSCTQHVGSENGADYWAPAFGSGF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3579 329 MobiDBLite consensus disorder prediction 167 187 - -
Mtr2g3579 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Mtr2g3579 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 189 240 IPR036638 GO:0046983
Mtr2g3579 329 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 20 316 - -
Mtr2g3579 329 Gene3D - 189 255 IPR036638 GO:0046983
Mtr2g3579 329 PANTHER OS05G0228400 PROTEIN 20 316 - -
Mtr2g3579 329 MobiDBLite consensus disorder prediction 167 188 - -
Mtr2g3579 329 CDD bHLH_AtbHLH_like 189 236 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3579 Mtr-Chr2 49775900 49779459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3579 1 270 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 38.462 2.53e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3579 - - gmx:100802121 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3579 2 49775900 49779459 Mtr2g3579 2 49775900 49779459 ECH