Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3575 ATGGCTAACAGTAACAATGAACAGATTATGAGTAGCAGTGAAAATACCTCACAGTTTATGGAGTTTGGAGATATAGAAAGTGATATGAAAGTTGGATTTGGATTTGCTATTCAAGGAATGGAAGATATAGGAAAAATTGATTTTAAAAAATTAAATGCAAGTGATGTTATGAAGTTTCATTTTCCAAATATTGCAGTGGCTTATGCATTTTACAATTGGTATGCTCGAATGAATGGTTTTTCTGCTCGTAGAAGAAAAGTAAGGAGAAACAAAAACAACGAGATTATACAACAAATATTTGTTTGCTACAGACAAGGTTTCAGAGAAAAAAAGCTTGAGAACAATAAAATCCGTAAGCGTGAGGCAAGAGCTGACACTAGGTGCGGATGTGATGCCAAATGTAGTGTGCACATTGATTCTGGTAGTCGATGTTGGTATGTATGGGATTTTAACAATGACCACAATCATAGCCTTGTCGATGATGATTTTATTGCAATTCAAAGATTTTTCTTACAAACAAACAACCTTATGCCATCAACAGTCACACCCGAAACAAAAATAAAACACAGACTCTGGAATTATACCAAATTTAAAGAACTAACAAGAAGTGTGATTAACCAAACATTGAACGGTTGA 636 0.3396 MANSNNEQIMSSSENTSQFMEFGDIESDMKVGFGFAIQGMEDIGKIDFKKLNASDVMKFHFPNIAVAYAFYNWYARMNGFSARRRKVRRNKNNEIIQQIFVCYRQGFREKKLENNKIRKREARADTRCGCDAKCSVHIDSGSRCWYVWDFNNDHNHSLVDDDFIAIQRFFLQTNNLMPSTVTPETKIKHRLWNYTKFKELTRSVINQTLNG* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3575 211 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 192 - -
Mtr2g3575 211 Pfam FAR1 DNA-binding domain 70 159 IPR004330 -
Mtr2g3575 211 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3575 Mtr-Chr2 49733440 49735712 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g3575 FAR1 2.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3575 - - mtr:MTR_2g101460 434.106