Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3520 ATGACATCTTCAGATGTTGATTGGAAACCAAAGATTGGAATGGGATTTGATTCTATGGAAGAGGCTAATAAGTTTTGCTTGCTTATAGTTTCCGAAGGGCTAAAAAGGAAGGAGAAAAGATACGCATATGAAGGAAAATATACGAGAGCCGATGTTAGAACAAATTGCCCTGTAAGAATTACACTTTCTCGTAAGAATGGAAAGTTGGTCATCAATGACTTTGAAGAAGAACATAACCATGATCTACAAAATTCTGAGACAAAACACATGCTTCGGTCACATAGAAAGATAACTGAGGTGCAAGCATATGAGATTGATTTGGCTAATGACTCTGGATTAAGGCAGAAGTCAACATTTCAACTTTTGAGCACACAAGCAGGGCACAGAGCTAATGTTGGATTTACAGAGGTGGATGTAAGAAACTACATCACTGCAAGAAGAAAAAGAAGTATGGCATATGGTGAGATTGGATGTCTTTCAAAATATTTTCAACGACAATTGTTGGAGAATCCATCCTTCTTTCATGCATATCAGATGGATGTAGAAGAACATATTACAAATGTGTTTTGGTGTGATGCACAGATGATTTTGGATTATGGGTATTTTGGCGATGTTGTTTCTTTGGACACCACATACTGTACCAACTATGCCAATAGACCACTTGCTTTTTTTTCTGGTTTCAACCATTATAGAGGTTCAGTCATATTTGGGGCGGCACTAATGTATGATGAGACAAGTGAGTCATTTAGATGGTTGTTTGATACATTCTTACAGGCACACAACAACAAAAAACCAAAGACGATCTTCACTGACCAAGATCAAGCAATGGCAAGGGCAGTTGCAGATGTGATGCCCGAGACTCATCATGGTTTATGCACATGGCATTTGTTACAAAATGGAGTTAAACATCTTGGGAACATGATGAAGGGAGGATCTTCTTTGCTTAGTGATATCAAAAAATGCATGTATGATATTGACATTGAAGCAAATTTTGAGAAACTTTGGTTTGACATGATCCACAAATTTAATATTCATGACAAATCTTGGATCATTTCAACTTATGAGCTTAAAAAAAAATGGGCTTCATGTTATATGAAGGGAGTGTTAACACTTGGTATGCGAAGTACACAAGTTAGTGAAAGTTTGAATGCTCACTTCAAGTCTTGTATGAAACCGAATGTGAATATCCTAGAATTCTTCAACCATTTTGAAATAGTTGTTGAGGAGAAGAGAGCAAAAGAATTGAGTTGTGTGTATGAATCCTCCCATAAGCTTGCAAGGTTAGCATATGAAACTGCACCAATACTAATTCAAATGGGAAAAACATACACACACACTGTATTTGAATTGTTTCAAGATGAGTTTAAGTTATTCTTAACTTTATCTGTACCAATTAGACATGAATCTGACTCTCTTTGTGAATATGTCATCACAAAGGCAAAACATGAAGGATCTTGGAGAGTTTAA 1467 0.3626 MTSSDVDWKPKIGMGFDSMEEANKFCLLIVSEGLKRKEKRYAYEGKYTRADVRTNCPVRITLSRKNGKLVINDFEEEHNHDLQNSETKHMLRSHRKITEVQAYEIDLANDSGLRQKSTFQLLSTQAGHRANVGFTEVDVRNYITARRKRSMAYGEIGCLSKYFQRQLLENPSFFHAYQMDVEEHITNVFWCDAQMILDYGYFGDVVSLDTTYCTNYANRPLAFFSGFNHYRGSVIFGAALMYDETSESFRWLFDTFLQAHNNKKPKTIFTDQDQAMARAVADVMPETHHGLCTWHLLQNGVKHLGNMMKGGSSLLSDIKKCMYDIDIEANFEKLWFDMIHKFNIHDKSWIISTYELKKKWASCYMKGVLTLGMRSTQVSESLNAHFKSCMKPNVNILEFFNHFEIVVEEKRAKELSCVYESSHKLARLAYETAPILIQMGKTYTHTVFELFQDEFKLFLTLSVPIRHESDSLCEYVITKAKHEGSWRV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3520 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 479 IPR031052 GO:0006355
Mtr2g3520 488 PANTHER OS03G0181600 PROTEIN 32 479 - -
Mtr2g3520 488 Pfam MULE transposase domain 205 299 IPR018289 -
Mtr2g3520 488 Pfam FAR1 DNA-binding domain 31 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3520 Mtr-Chr2 49269959 49271508 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g3520 MULE 8.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3520 - - cam:101507984 676.011