Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3517 ATGAATTGGTTAACAAACCGTTGGACCGGCGTCGCCGCCGCAATATGGATCCAATCAAGCTGCGGCGCCTCCTACACCTTCAGCATCTACTCTCCTCTCCTCAAATCAACCCAACACTACTCCCAATCCACACTCGACACCGTTTCCGTTTTCAAAGACATCGGCGCCAACTTTGGCGTTCTTTCCGGCCTCCTTTACTCCGCCGTTACGCCTTACGGTGATGGCCCATCATCGTCTAAGAAGTCTAGATGGAATTCTCTTGGTGGGCCATGGATTGTTGTGGCTGCTGGTGCTGTTCAGTGTTTTGTTGGGTTTTTGTTTATGTGGGGTTGTGTTGTTGGGTTGATTGAGGATGTTCCTGTTCCTGTTATGTGTTTTTTTGCTTGGCTTTCTGCTAATGGACAAACTTTTTTGAATACTACTAATGTTGTTACTGGCTTGAGGAATTTTCCGGAGTATAGTGGGACTATCATTGGGATTATGAAGGGTTTTCTTGGGCTTAGTGGAGCTATCCTGATTCAACTGTACCACACATTTTTCGATGGTGACCCAGCCACCTTCCTTCTGATGCTAGCTTGCTTACCTGCATTCATCTCTGTGTTGTTTATGTTTCTGTTGAGGATCTATCAAGTGCAAGACTGTGATTACAAGAAGCATTTAGATGGTTTTTCTGTGGTCACTGTCATTATTGTTGTGTATCTCATGTTCACAATAGTTTTGCAAAACTTCGTGAGCTTACCGTATTGGGCACGGGTTTTTACATTCACAGTCCTTATGGTTTTACTAGCATCACCTTTTGGCATTGCTGTGAAAGCTCATTGGGAGGACTCGAGGATGTTTTCACAAGCTCACTCCATTGAGACTACTGCCCCCACGATAGAATACCAAGAGCTACCTAGCGAGGAGGTGCAAGTACAGGATACTTCAGATAATACATTGCTCGTTGAAGAAGAAATGAATTTATTACAAGCTATGTGTACAGTTGAGTTTTGGATGTTGTTTGTGACCATGATTGCCGGTTTGGGTTCTGGGCTTTCAATGATAAATAATATGAGCCAAATAGGAGAATCTCTTGGGTATAGCACTATTCAGATTGGCAATATGGTGTCATTGTGGAGTATGTGGAATTTTCTCGGCCGTTTTGGTGGCGGCCATGTATCCGATTATATCATGCACAAAAGAGGTTGGCCACGGCCCCTGCTATTGACCGTAACTCTGGGGGTTACAATTCTTGGTCATTTAATCATAGCTTCTGGTTTCCCTGGAAATTTTTATTTGGGTCCTGTCCTGGTGGGAATATGCTATGGTACAAATTGGTCCTTAATGCCAACAGTCACTTCTGAGATATTTGGTGTGAAACACATGGGTACCATTTTCAATGCTATTGCTGCAGCGAGTCCACTTGGGTCTTATATACTTTCTGTGAAAGTTGTTGGAAATATATATGACAAGGAAGCCAGTGAAGAAGATAACTCCTGCTTCGGCATCCACTGTTTCAGATTGTCATTTCTGATCCTGGCCGGTGTGACTTTTGTAGCGTTTTTGGTCAGTCTGGCATTGTATTTCCGGACCCGAAGGTTCTATAAACTAGTTGTCCTTAAAAGATTGAAACATTATGTGCGATGA 1626 0.4348 MNWLTNRWTGVAAAIWIQSSCGASYTFSIYSPLLKSTQHYSQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYGDGPSSSKKSRWNSLGGPWIVVAAGAVQCFVGFLFMWGCVVGLIEDVPVPVMCFFAWLSANGQTFLNTTNVVTGLRNFPEYSGTIIGIMKGFLGLSGAILIQLYHTFFDGDPATFLLMLACLPAFISVLFMFLLRIYQVQDCDYKKHLDGFSVVTVIIVVYLMFTIVLQNFVSLPYWARVFTFTVLMVLLASPFGIAVKAHWEDSRMFSQAHSIETTAPTIEYQELPSEEVQVQDTSDNTLLVEEEMNLLQAMCTVEFWMLFVTMIAGLGSGLSMINNMSQIGESLGYSTIQIGNMVSLWSMWNFLGRFGGGHVSDYIMHKRGWPRPLLLTVTLGVTILGHLIIASGFPGNFYLGPVLVGICYGTNWSLMPTVTSEIFGVKHMGTIFNAIAAASPLGSYILSVKVVGNIYDKEASEEDNSCFGIHCFRLSFLILAGVTFVAFLVSLALYFRTRRFYKLVVLKRLKHYVR* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3517 541 Pfam Major Facilitator Superfamily 333 526 IPR011701 GO:0022857|GO:0055085
Mtr2g3517 541 CDD MFS_Mch1p_like 7 513 - -
Mtr2g3517 541 SUPERFAMILY MFS general substrate transporter 4 207 IPR036259 -
Mtr2g3517 541 PANTHER F25A4.25 PROTEIN 3 539 - -
Mtr2g3517 541 SUPERFAMILY MFS general substrate transporter 245 526 IPR036259 -
Mtr2g3517 541 Gene3D MFS general substrate transporter like domains 321 530 IPR036259 -
Mtr2g3517 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 539 - -
Mtr2g3517 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 328 541 IPR020846 GO:0022857
Mtr2g3517 541 Pfam Nodulin-like 7 68 IPR010658 -
Mtr2g3517 541 Pfam Nodulin-like 90 269 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3517 Mtr-Chr2 49255960 49259087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3517 1 538 Nodulin-like Gene Family AT1G74780 54.679 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3517 - - gmx:100775628 868.996