Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3511 ATGAGTCGTGAACTATCGAAGCGAGGGAAGCATGAAAAAGGTTCTGATGGTGCTGGAAAGGTTATTGTTGCTGTCAAGGCGTCGAAGGAAATTCCAAAGAGTGCTCTTGTTTGGTCTCTAACTCATGTTGTTCAACCTGGTGATTGCATTACATTGCTAGTGGTTGTACCTTCACAAAGTTCAGGCCGAAAATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCTAATGGACACAAGAAGTCAACAATCCTGGGAGCTAGTTCAGAGCACAAAAATGATATAACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAAGAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCCGCAGAAGCCAAGAAAGCTCAAGCCAATTGGGTCGTATTAGATAAACAGCTCAAGCATGAGGAAAAACAATGCATGGAAGAGCTGCAGTGCAACATTGCGGTTATGAAAGGTTCCCAAGCTAAGGTGCTTCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAACATGTCCATTATCTTCCGAGCAGCGTGTGATGCCTGGAAAACAAGCCAAGAAGAAAAACGGTTCTTTTAATTCCACCACAATAGGACAAGTTGTCACACCTACTAGCAGCCCCGAGCTAGAGACATCATTTACTGCAACTGAAGTTGGCACTTCATCAGTTTCAAGCTCTGATCCTGGAACTTCACCGTTTTTCGCCTCTGAAATCATTGTCGAGTCAAAGAAAGAGGAAACTATCACCGAAAATCAAGAAACTGATGATATCATTTCTGACACAGACAGTGAAAATTTGTCCGCTTCTTCTGCAAGCTTGAGGTTTCAGCCGTGGATTGCAGATTTATTTTTACATAAACAATCATCTCAACGTGAAGACGAAAGATCGGACTCAGAGAGATCTTGTGACAGGCTTCAAATGTCTACAACTAGAGCTTTGCTAGAAAAGTTCTCAAGGCTTGACAGAGAAGCCGAAATTGAAAACTCAACTTATAAGACTAACATGGAATTCAGTGGAAGCGTAAGAGAAGCAGTAGCGTTATCTAGAAATGCCGCACCTGGCCCACCACCATTATGTTCAATATGTCAACACAAAGCTCCGGTATTTGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTAGCCACTGGTGGATTTTCACCAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGAACTCTACCAGAAGGGCAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCATGAATTCTGCTCAGAGGTAGAAGTCCTGAGTTGTGCACAGCACCGGAATGTTGTTATGTTGATTGGCTTCTGTATTGAGGATAAGAGAAGGCTGCTGGTTTATGAATATATATGCAACGGATCATTGGACACTCATTTATATGGGAGACAACGGAAACCATTAGAATGGTCAGCTCGTCAGAAAATTGCTGTCGGGGCTGCTCGTGGATTGCGATATCTTCATGAAGAGTGCAGGGTGGGATGCATTGTTCACCGTGACATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAGCCACTGGTTGGTGATTTTGGACTTGCAAGGTGGCAGCCTGATGGAGACACTGGAGAGGAGACTAGAGTTATTGGAACATTTGGGTATTTGGCTCCTGAATATACTCAAAGTGGACAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGAGTGGTATTAGTGGAGCTTGTGACAGGGCGCAAAGCTGTGGATATCAACCGGCCCAAGGGACAACAGTGTCTTACTGAGTGGGCACGGCCACTTTTAGAAGAGTATGCCATTGAGGAGCTGATTGATCCAATGTTGGGAAGTCACTATTCAGAACATGAGGTCTCTTGCATGATACATGCGGCATCCTTATGCATAAGGCGAGATCCTTACTCTAGACCACGCATGTCACAGGTTTTGCGAATACTAGAGGGTGACACGGTCATGGAATCGCCACGCCATTATGGTGGTTCTCCTTCCCTTTGA 2088 0.4411 MSRELSKRGKHEKGSDGAGKVIVAVKASKEIPKSALVWSLTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSTILGASSEHKNDITDSCSQMILQLHDVYDPKKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIAVMKGSQAKVLRLNLVGSQKKDLEETCPLSSEQRVMPGKQAKKKNGSFNSTTIGQVVTPTSSPELETSFTATEVGTSSVSSSDPGTSPFFASEIIVESKKEETITENQETDDIISDTDSENLSASSASLRFQPWIADLFLHKQSSQREDERSDSERSCDRLQMSTTRALLEKFSRLDREAEIENSTYKTNMEFSGSVREAVALSRNAAPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSPANFLAEGGFGSVHRGTLPEGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRKPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGEETRVIGTFGYLAPEYTQSGQITEKADVYSFGVVLVELVTGRKAVDINRPKGQQCLTEWARPLLEEYAIEELIDPMLGSHYSEHEVSCMIHAASLCIRRDPYSRPRMSQVLRILEGDTVMESPRHYGGSPSL* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3511 695 CDD USP_Like 20 144 - -
Mtr2g3511 695 CDD STKc_IRAK 413 679 - -
Mtr2g3511 695 SUPERFAMILY Protein kinase-like (PK-like) 391 679 IPR011009 -
Mtr2g3511 695 Gene3D Phosphorylase Kinase; domain 1 379 482 - -
Mtr2g3511 695 MobiDBLite consensus disorder prediction 199 226 - -
Mtr2g3511 695 Gene3D Transferase(Phosphotransferase) domain 1 483 689 - -
Mtr2g3511 695 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3511 695 ProSitePatterns Tyrosine protein kinases specific active-site signature. 528 540 IPR008266 GO:0004672|GO:0006468
Mtr2g3511 695 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 685 - -
Mtr2g3511 695 Pfam Protein tyrosine and serine/threonine kinase 413 676 IPR001245 GO:0004672|GO:0006468
Mtr2g3511 695 MobiDBLite consensus disorder prediction 206 226 - -
Mtr2g3511 695 PANTHER OS01G0253100 PROTEIN 16 685 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3511 Mtr-Chr2 49185589 49190636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3511 387 680 Trihelix Transcription Factor Family AT1G70460 52.492 1.16e-97 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mtr2g3511 PK_Tyr_Ser-Thr 9.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3511 - - gmx:100789216 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3511 2 49185589 49190636 Mtr2g3511 2 49185589 49190636 ECH
Mtr2g3511 2 49185589 49190636 Mtr8g0460 8 5357618 5363859 PCT