Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3510 ATGGACAACGAAGAAGATCCTCCTGAACCCCCAACCAAAAGACACAAATGCTCAGCATGCTATAAGCAATATAAGAAGAAAGAATATCTTGTTGAGCACATGAAAACCGCTTACCACTCTATCCATCAACCTAAATGTGTGGTTTGTGAAAAGCATTGCAAATCTTTTGAATCTCTTAGGGAACATCTAACCGGCCCTTTGGCTAAAGGACTTTGTTCAGCGGTTTTCTCTCAGTACGGTTGTCAACTTTGTTTGACCCGATTTGACAGTCATGCTTCTCTCAGTGACCATAGAGAAACTTGTCGCCTAGCTGCCCCTGTTCCTCTAGGGACAAACGAATTTCCTTGTACAAACATCCATAATAATTTTCTGGATTCTTCTGATGAAAATGATGCTGACTGCCTCCCGAGAGCAATTGCTATGGACTGTGAAATGGTTGGTGGTGGAAGTGATGGATCTCTGGAACTTTGTGCTAGAGTGTGTTTAGTTGATGAAGATGAGAACTTAATCTTCCACACATATGTAAAACCTCAAATCCCTGTTACCAATTACAGGTATGATATAACTGGGTTGACAGAAGAGCATCTTCAAGATGGTATGCCACTTAAGGAAGTTCGGGAAAAGATTTTGCAAATTTTATACAATGGAGAATCCATTGGAAAAGTTAGGTTGGATGGTGGAAAGGCCAGGCTTCTTGTAGGGCATGATTTGGCACATGATTTGGATTGCTTGGGAATGAGTTATCCTGATCACTTGATGAGAGACACTGCAAAGTACCGTCCATTGATGAAGACAAACTTGGTCTGCTATTCGCTCAAGTATCTTACCCGAACATATCTAGGTTATGATATCCAAACCGGCACTCACAATCCATATGAAGATTGTATTTCCGTGATGAGACTGTACAAGAGAATACGAGGTCAAAGTCACAAGGAAAAAGGCTACAGAACATTGACTCCGAGTGACAACATCTTGGACATGTTCGACAGTTGGAGATCCAAGGAACTAGACAACCTCACACCAGATGAACTTTATGCCATCTCAAAATCAGATTATAGGTGTTGGTGTTTGGATTTGAAGCCAAGATTGGCGCAAGCTTGA 1101 0.4151 MDNEEDPPEPPTKRHKCSACYKQYKKKEYLVEHMKTAYHSIHQPKCVVCEKHCKSFESLREHLTGPLAKGLCSAVFSQYGCQLCLTRFDSHASLSDHRETCRLAAPVPLGTNEFPCTNIHNNFLDSSDENDADCLPRAIAMDCEMVGGGSDGSLELCARVCLVDEDENLIFHTYVKPQIPVTNYRYDITGLTEEHLQDGMPLKEVREKILQILYNGESIGKVRLDGGKARLLVGHDLAHDLDCLGMSYPDHLMRDTAKYRPLMKTNLVCYSLKYLTRTYLGYDIQTGTHNPYEDCISVMRLYKRIRGQSHKEKGYRTLTPSDNILDMFDSWRSKELDNLTPDELYAISKSDYRCWCLDLKPRLAQA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3510 366 Gene3D Classic Zinc Finger 2 65 - -
Mtr2g3510 366 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 4 361 - -
Mtr2g3510 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Mtr2g3510 366 PANTHER EXONUCLEASE FAMILY PROTEIN 4 361 - -
Mtr2g3510 366 Gene3D - 136 319 IPR036397 GO:0003676
Mtr2g3510 366 SMART exoiiiendus 137 311 IPR013520 -
Mtr2g3510 366 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Mtr2g3510 366 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Mtr2g3510 366 Pfam Exonuclease 139 302 IPR013520 -
Mtr2g3510 366 SUPERFAMILY Ribonuclease H-like 138 308 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3510 Mtr-Chr2 49178247 49181305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3510 1 358 C2H2 Transcription Factor Family AT3G27970 50.559 6.77e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3510 K18327 - gmx:100805841 585.489