Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3507 ATGGATAAGCTCATTCATGGAACAATTGAGGCTACCATCTTCAATGCAACTCCTTACTCTCCTTCATTTCCCTTCAATTGTTTATTTGTAAATGGAAAGCCTGCTTATGTGACAATCAAGATAGACAACAAGAAAGTGGCAAAAACAACACAAGAAAGTGAACGTGTTTGGAACCAAACATTTCAGATTCAGTGTGCTCATCTAGCTGATTCAACCATCACCATTACACTGAAAACAACATGTACCATATTAGGAAAATTCCATATCAAGGCACAACAATTGAAGGAAGATAGTTTGATTAATGGATCCTTCCCTCTCCTAATGGAAAATGGTAAACCAAATCAAGAACTAAAATTAAGGTTTATATTATGGTTCAAGCCAGCAAATTTGGAACCAAGTTGGACAAAGCTACTAAGTAGTGAAGAGTTTCAAGGGCTTAGGGATGCTACATTTCCACAAAGGTCTAATTGTCATGTTAAGCTCTATCATGATGCTCACCATTCACCTACTTTTCAACCTCCTTTTGATAATTGTGGAGTCCCTAGAAAACTATGGGAGGATGTTTATAAAGCTATTGAGGGTGCAAAATATTTAGTATATATTGCAGGCTGGTCTTTCAATCCTAAGATGGTTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCTAGAGAAATAAAGTTGGGTGAGCTATTGAAGAAGAAAGCAGAAGAAGGAGTGGCTGTAAGGGTTATGATTTGGGATGATGAAACATCATTTCCATTTATCAAGAACAAAGGTGTGATGAACACACACGATGAGGAAGCTTTTGCTTACTTTAAACACACAAAAGTAGTATGCAGAAGGTGTCCTAGATTACATGACAAATTCCCAACAATCTTTGCTCATCATCAGAAAACCATAACTGTGGATACCAAAGCTCCTAACTCTGTCAATGACAGAGAAATAATGAGCTTTTTGGGTGGTTTAGATTTGTGCGACGGTCGATATGATACCGAGAAACATTCTTTGTTCGAAACACTTACTCAGGAATCACATTACCATGATTTCTACCAGACAAACATTGCAGGAGCTAGCCTCAACAAAGGAGGTCCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTACTGGCGAGGCGGCTTGGGATGTTTTAACCAATTTTGAACAAAGATGGACAAAGCAATGTGATTCGTCTCTTCTAGTCCCTGCAAACACCTTAGAAAATCTCATTCCTATTTCCTCAACAAGCACTTCTATGGAAAGGAATTGGAAAGTACAGGTATATCGGTCGATCGACCATGTCTCGGCTAGCCAATTGTTTAGAAAGCTAACAGTTGAGAGTAGCATCCACGAAGCTTACGTCGAAGCAATAAGGCGTGCTGATAGGTTTGTGTACATTGAAAACCAATATTTCATTGGAGGGTGCCATTTGTGGCAGAAAGATAAGAACAGTGGCTGCACAAATTTGATTCCTATTGAGATTGCACTCAAGGTGGTCAACAAGATTAAAGCAAGAGAAAGGTTTGCAGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACAAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCAATCATAGAAAGTGGTGAGCCAGGACATCCAAGAGATTACTTGAATTTCTTTTGCCTTGCAAATAGAGAAAAGAAGGAAAATGAAGAATATCTTCCTCCACATTCTCCTCTTCCTGATACTCAATATTGGAGTGCACAGAAAAATAGAAGATTCATGGTTTATGTTCACTCCAAGCTCATGATAGTGGATGACCTATATATACTAATAGGATCAGCAAATGTAAACCAAAGATCGATGGACGGGCAAAGGGACACAGAAATTGCGATCGGAGGCTACCAGTCTCATCAAGACGGAGTTGATCATCCCATAAGCAAAGGTGACATTCATGAATACAGAATGTCGATGTGGTATGAACACACTGGTAGTGCTGAGAAGTTGTTTTTAGAGCCAGAAAGTTTAAAATGTGTGCAAAGAATGTGCTCAATAGGAGATAAAATGTGGAAAATCTATAGTAGTGAAGAAATTGTGGACATGGAGGGTGTGCACCTAGTAACTTACCCTATGATAGTAACACAAAATGGATCTGTGGAAGATCTAACTAATGGTGAGGATCATTTTCCTGATACAAAAGCTCTAGTGAAAGGGAAAAGATCAAAATTATTACCCTCTGTCATTACCACTTAG 2271 0.3893 MDKLIHGTIEATIFNATPYSPSFPFNCLFVNGKPAYVTIKIDNKKVAKTTQESERVWNQTFQIQCAHLADSTITITLKTTCTILGKFHIKAQQLKEDSLINGSFPLLMENGKPNQELKLRFILWFKPANLEPSWTKLLSSEEFQGLRDATFPQRSNCHVKLYHDAHHSPTFQPPFDNCGVPRKLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVAVRVMIWDDETSFPFIKNKGVMNTHDEEAFAYFKHTKVVCRRCPRLHDKFPTIFAHHQKTITVDTKAPNSVNDREIMSFLGGLDLCDGRYDTEKHSLFETLTQESHYHDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDSSLLVPANTLENLIPISSTSTSMERNWKVQVYRSIDHVSASQLFRKLTVESSIHEAYVEAIRRADRFVYIENQYFIGGCHLWQKDKNSGCTNLIPIEIALKVVNKIKARERFAVYIVIPMWPEGVPESEPVQDILHWTRETMTMMYKLIGEAIIESGEPGHPRDYLNFFCLANREKKENEEYLPPHSPLPDTQYWSAQKNRRFMVYVHSKLMIVDDLYILIGSANVNQRSMDGQRDTEIAIGGYQSHQDGVDHPISKGDIHEYRMSMWYEHTGSAEKLFLEPESLKCVQRMCSIGDKMWKIYSSEEIVDMEGVHLVTYPMIVTQNGSVEDLTNGEDHFPDTKALVKGKRSKLLPSVITT* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3507 756 PIRSF PLD_plant 4 756 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mtr2g3507 756 SUPERFAMILY Phospholipase D/nuclease 419 685 - -
Mtr2g3507 756 PANTHER PHOSPHOLIPASE D ALPHA 3 756 - -
Mtr2g3507 756 PANTHER PHOSPHOLIPASE D 3 756 IPR015679 -
Mtr2g3507 756 Pfam Phospholipase D Active site motif 293 329 IPR001736 GO:0003824
Mtr2g3507 756 Pfam Phospholipase D Active site motif 603 627 IPR001736 GO:0003824
Mtr2g3507 756 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 600 627 IPR001736 GO:0003824
Mtr2g3507 756 Pfam Phospholipase D C terminal 673 745 IPR024632 -
Mtr2g3507 756 Pfam C2 domain 35 106 IPR000008 -
Mtr2g3507 756 SUPERFAMILY Phospholipase D/nuclease 142 403 - -
Mtr2g3507 756 Gene3D Endonuclease Chain A 442 646 - -
Mtr2g3507 756 Gene3D Endonuclease Chain A 170 422 - -
Mtr2g3507 756 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 292 329 IPR001736 GO:0003824
Mtr2g3507 756 SMART pld_4 600 627 IPR001736 GO:0003824
Mtr2g3507 756 SMART pld_4 292 329 IPR001736 GO:0003824
Mtr2g3507 756 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 121 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3507 Mtr-Chr2 49166302 49170239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3507 27 756 Phospholipase D Gene Family (Wang group) AT1G55180 62.366 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3507 K01115 - gmx:100807431 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3507 2 49166302 49170239 Mtr2g3507 2 49166302 49170239 ECH
Mtr2g3507 2 49166302 49170239 Mtr8g0463 8 5377901 5382675 PCT