Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3493 ATGGCTACCAACATAGCAGAAAGAGTGCAATATCCATTAGACTCTTCCTCCTATAAAATCGTCGACGAGATTGGCGCCGGTAACAGCGCCGTCGTCTACAAAGCAATCTGCATCCCTATAAACTCCACACCAGTAGCTATCAAATCCATAGACTTGGATCGTTCGCGCCCCGACCTTGACGATGTTAGACGTGAAGCAAAGACATTATCACTTCTTTCCCACCCCAACATCCTCAAAGCTCACTGTTCTTTCACCGTTGACAACCGTCTTTGGGTGGTTATGCCATTCATGGCTGGAGGTTCATTACAATCCATTATCTCTCACTCTTTCCAAAACGGCTTAACAGAACAATCCATAGCTGTTATTCTCAAAGACACTCTCAATGCTCTTTCTTACCTTCATGGACAAGGACATCTTCATAGAGATATCAAATCTGGTAACATCCTTGTTGACTCAAATGGATTAGTGAAACTTGCAGATTTTGGTGTTTCTGCTTCCATTTATGAATCAAACAACTCTGTAGGAGCATGTTCTTCTTATTCATCTTCGTCTTCGAATTCTTCTTCTTCTCATATATTTACTGATTTTGCTGGAACACCTTATTGGATGGCTCCTGAGGTTATTCACTCTCATAATGGTTACAGTTTCAAAGCTGATATCTGGTCTTTTGGGATAACAGCTTTGGAGTTAGCACATGGAAGACCACCACTTTCTCATCTTCCTCCTTCTAAGTCATTGATGCTAAACATTACAAAGAGGTTTAAGTTTTCTGATTTTGATAAACATAGTTACAAGGGTCATGGTGGTAGTAACAAATTCTCTAAGGCTTTTAAGGATATGGTTGCTTTATGTTTGAATCAAGATCCTACAAAAAGACCCTCTGCTGAGAAGTTACTTAAGCATTCATTCTTTAAAAACTGCAAGGGATCAGATGTTTTGGTGAAGAATGTGTTGAATGGATTGCCTAGTGTTGAGAAAAGGTATAAAGAGATCAAAGCTATAATGGATCCAGATTCAAAGTGCAAGGATGATGGAGACGACGATGATGACGAGTCAGTGAAAAATGTGAAACAGAGAAGAATCAGTGGCTGGAATTTCAATGAAGATGGATTGGAACTTGTGCCTGTATTCCCAAAGGATCAAAGCAAAGATGATGAAGTTGTGAAACAAGTTCGGTTCGAAGAAGAAAAAGTGATCCAAGAGGATGCTGTTGTTACAGCATCAGGAACTGTGATGGAGCCAAAGACCAATACTTCTGATGTGGTTGATCATGAAAATGTCGGTGGTGTTGTTAAGAACCGTGAAGCTACGTTGGCAACGTTGAATGTGTTGAAAGAGAGCTTGGAACAAGAGTTGGGACAAGTTAAGTTTCTAATGAATCTAATTGGTGGAGAGGAGATTCATGTGGCTGAAAGTGATGAGAAAATGGTGCAAGAGATCTCTAAGTTGAGGACAGAATTGGAAAATGAGAAGAAGAAGAACTTGCAGCTGGAGATGCAGCTGGAGAATATCAAGCTTCACCTAATTTCCTCTGCTGCTAATAGTCCTACTAGTTAA 1557 0.4021 MATNIAERVQYPLDSSSYKIVDEIGAGNSAVVYKAICIPINSTPVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDNRLWVVMPFMAGGSLQSIISHSFQNGLTEQSIAVILKDTLNALSYLHGQGHLHRDIKSGNILVDSNGLVKLADFGVSASIYESNNSVGACSSYSSSSSNSSSSHIFTDFAGTPYWMAPEVIHSHNGYSFKADIWSFGITALELAHGRPPLSHLPPSKSLMLNITKRFKFSDFDKHSYKGHGGSNKFSKAFKDMVALCLNQDPTKRPSAEKLLKHSFFKNCKGSDVLVKNVLNGLPSVEKRYKEIKAIMDPDSKCKDDGDDDDDESVKNVKQRRISGWNFNEDGLELVPVFPKDQSKDDEVVKQVRFEEEKVIQEDAVVTASGTVMEPKTNTSDVVDHENVGGVVKNREATLATLNVLKESLEQELGQVKFLMNLIGGEEIHVAESDEKMVQEISKLRTELENEKKKNLQLEMQLENIKLHLISSAANSPTS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3493 518 Coils Coil 431 451 - -
Mtr2g3493 518 Coils Coil 470 507 - -
Mtr2g3493 518 SUPERFAMILY Protein kinase-like (PK-like) 15 308 IPR011009 -
Mtr2g3493 518 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 512 - -
Mtr2g3493 518 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Mtr2g3493 518 Pfam Protein kinase domain 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3493 518 SMART serkin_6 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3493 518 ProSiteProfiles Protein kinase domain profile. 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3493 518 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 6 512 - -
Mtr2g3493 518 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Mtr2g3493 518 Gene3D Transferase(Phosphotransferase) domain 1 100 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3493 Mtr-Chr2 49050332 49052306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3493 1 496 MAP Kinase Kinase Kinase Kinase AT4G14480 55.622 9.28e-177 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mtr2g3493 Pkinase 1.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3493 K08835 - gmx:100820227 633.639