Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3492 ATGAACAACAACAACAACAACATCATCTCAAGAAACGGCAACGGAACAACACAAGCTTGTGCTGCATGTAAATATCAACGTAGGAAGTGTGGTACATCCTGCATTCTCGCACCATATTTTCCTCACGATCGTCAAAAACAATTCTTAAACGCTCATAAATTGTTTGGTGTTGGTAAAATCACCAATATGATCAAGAATGTTCCACCTCATCTTAGAGATCATACCATGAGTTCTATTATTTTTCAATCTGATATGCGTGCTATGGATCCTGTTGGTGGTTGTTATAGATTCATTCAACAGCTTCAATCTCAATATGAATTTTATCAAGCTGAGCTTCATCTTACACGTCAACAAATTTCTATTTGTAAAGCTACACAATCACAACAACATCAACAACAATTTGCCGCTGTGTCTAATCATCATTATAATGACATGCATGTCATTAATCATAACAATAACGAGGATAATGATGCTGCTTTGAATATTATCAATCATTTTAACCAGCAGCATTTTGTTGATGATCAACTGAATATGAATATGCTGCCTCAACAGCAATTGCAACTGCAGCAGCAATATGTTGTCGATGATGTCTGTATTAACCCTAATTATGTTCCTTTACAAGAGGATCTTAATTCATGGGCAAACAATATTAATATACCGTTGTCTCCTTTAACTTTGGAGGGTAACAATAAGGAAGAAGATGGTGAAGAAGATCAGGAACGTGTTGGTGATGATCAAGGAAATGATCAGAAACCCGTTTTTGACCTAATCAATGAAATGAATTCTTTGGATACCAACAGCAGTAGTATTGATCCGGGGCACCAGGAGTTAGAACACATTATAATTTGGGGCATTTCATGTATGATTATGATGTTATGTGATGGTGATGATGATGATGAAGGGGTCTTGTGA 912 0.3629 MNNNNNNIISRNGNGTTQACAACKYQRRKCGTSCILAPYFPHDRQKQFLNAHKLFGVGKITNMIKNVPPHLRDHTMSSIIFQSDMRAMDPVGGCYRFIQQLQSQYEFYQAELHLTRQQISICKATQSQQHQQQFAAVSNHHYNDMHVINHNNNEDNDAALNIINHFNQQHFVDDQLNMNMLPQQQLQLQQQYVVDDVCINPNYVPLQEDLNSWANNINIPLSPLTLEGNNKEEDGEEDQERVGDDQGNDQKPVFDLINEMNSLDTNSSSIDPGHQELEHIIIWGISCMIMMLCDGDDDDEGVL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3492 303 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Mtr2g3492 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 15 266 - -
Mtr2g3492 303 Pfam Lateral organ boundaries (LOB) domain 19 116 IPR004883 -
Mtr2g3492 303 MobiDBLite consensus disorder prediction 222 252 - -
Mtr2g3492 303 PANTHER LOB DOMAIN PROTEIN 15 266 - -
Mtr2g3492 303 Coils Coil 98 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3492 Mtr-Chr2 49048470 49050068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3492 18 191 AS2 family AT3G13850 45.000 5.33e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr2g3492 LOB 9.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3492 - - mtr:MTR_2g100020 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3492 2 49048470 49050068 Mtr8g0490 8 5707163 5708531 PCT