Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3486 ATGGCATCATCATCTTCTTCTCATGTTCCTCCAGTAAAATATGATGTATTCATAAGCTTTAGAGGCACAGACATACGTCATGGTTTTCTCAGCCATTTGAGAAAGGAACTGAGGCAGAAGCAAGTTGATGCCTATGTAGATGATAGACTTGAAGGAGGAGATGAAATATCAAAAGCACTTGTCAAAGCCATTGAAGGATCACTCATGTCTTTGATAATATTTTCCAAAGACTATGCTTCTTCAAAGTGGTGCTTGGAAGAGCTTGTTAAAATTGTTGAATGTATGGCTAGAAATAAACAAGTTGTGATCCCTGTTTTCTACAATGTTAATCCAACGGATGTGAGGCATCAAAAAGGGACTTATGGTGATTCATTAGCTAAACATGAAAAAAATAAAGGAAGCTTAGCCAAGGTTCGAAATTGGGGATCTGCTTTGACTATAGCTGCTAATCTTTCTGGATTTCATTCATCAAAATATGGGGATGAAGTTGAGCTTATAGAAGAAATTGTCAAATGTTTGTCATCCAAGTTGAATCTGATGTACCAAAGTGAGTTAACAGATCTTGTTGGAATTGAAGAAAGGATTGCAGATTTGGAGTCATTGTTATGCTTAGATTCAACTGCAGATGTTCTTGTCATTGGCATTTGGGGCATGGGCGGTATTGGGAAGACAACTCTCGCAGCTGCAGTGTATAACCGTCTTTGTTTTGAATATGAAGGAAGTTGCTTTATGGCAAACATAACAGAAGAATCAGAGAAGCATGGAATGATTTATCTGAAGAATAAAATTCTTTCTATATTGCTAAAGGAAAATGATCTACATATTGGTACACCTATTGGAGTTCCCCCTTATGTTAAGAGAAGGTTGGCTCGTAAAAAGGTTCTTCTTGTTCTGGATGATATCAATGATTTAGAGCACTTAGAGAATTTAGTTGGAGGACTTGATTGGTTTGGATCTGGTAGTAGAATCATCGTAACAACCAGAGATAAGCAAGTGCTCGGTAAAAGAGTCAATTGTACATATGAGGCCAAGGCATTGCAGTCTGATGATGCTATTAAACTTTTCATCATGAATGCCTTTGAACATGGCTGTCTTGACATGGAGTGGATTGAGCTATCAAGAAGGGTTATTCATTATGCTAATGGAAATCCATTAGCTTTGAAAGTTTTAGGTTCTTTTCTTTATGGTAAAAGCAAAATAGAATGGGAGAGTCAATTGCAGAAACTGAAGAAAATGCCTCATGCAAAAATTCAGAATGTATTGAGATTGAGTTATGATAGACTTGATCGAGAAGAGAAGAACATATTTTTGTATATTGCATGTCTTTTGAAGGGATATGAAGTGCAACAGATAATAGCTCTGCTTGATGCCTGTGGTTTCTCAACAATTATCGGATTAAGAGTCCTTAAAGATAAAGCCCTTATAATTGAAGCCAAGGGCTCTGGAAGATCAATTGTATCCATGCATGATTTGATACAAGAAATGGGTTGGGAGATTGTTCGAGAAGAATGTGTTGAAGACCCTGGGAAACGCAGCAGGTTATGGGATCCTAATGATGTTCATCAAGTATTGACAAATAACACGGGAACTAAAGCCATTAAAAGCATAACTCTGAACGTCTCAAAATTTGATGAGCTGCACTTAAGTCCTCAAGTCTTTGGTAGGATGCAGCAGTTAAAATTTCTTAAATTTACCCAACATTATGGCGATGAGAAAATCCTGTATCTTCCTCAGGGTCTTGAATCTTTACCAAATGACCTACTGCTTTTTCAATGGGTTAGTTACCCTTTGAAATCCTTGCCTCAGTCTTTTTGTGCAGAAAATCTTGTTGAGCTAAAATTGACTTGGAGCCGAGTGGAAAAACTTTGGGATGGGATCCAGAATATTCAGCATTTAAAGAAAATTGACCTCAGTTATTCCAAATATCTGCTAGACCTCCCTGATTTTTCAAAGGCCTCAAATCTTGAAGAAATAGAACTCTTTGGTTGCAAAAGTTTGCTTAATGTTCATCCTTCAATTTTACGTCTCAACAAGCTTGTGCGACTGAACCTATTTTACTGCAAAGCGCTTACCAGTCTTCGAAGTGATACCCATTTACGATCCCTTCGCGATCTCTTCCTCAGTGGTTGCTCAAGACTCGAAGATTTTTCAGTGACATCTGATAATATGAAAGACTTAGCTTTATCTTCAACAGCTATCAATGAATTGCCCTCATCAATTGGTAGTCTCAAAAATCTCGAAACATTGACTCTTGATTTCTGCAAGAGCCTAAACAAGCTTCCAAACGAAGTTATCGACCTGAGATCACTTCGAGCTCTTTATGTTCATGGATGCACACAACTTGATGCGTCAAATCTTCATATCCTACTTAGCGGTTTAGCTTCTTTAGAAACATTAAAGCTGGAAGAATGTCGTAACTTATCCGAAATTCCAGACAACATCAGCTTGCTATCATCGTTGCGGGAGTTGTTACTAAAAGAAACTGATATTGAGAGATTTCCTGCAAGCATCAAGCATCTTTCTAAGCTGGAAAAGCTTGACGTAAAGGGCTGCAGGAGGCTTCAAAATATGCCAGAGCTTCCGCCATCACTAAAAGAGTTATATGCTACTGATTGTTCGTCTTTAGAGACTGTAATGTTCAATTGGAATGCTTCTGATCTACTACAACTACAAGCATATAAGTTACACACACAATTCCAGAACTGTGTTAACTTGGATGAACTTTCACTCAGGGCTATTGAAGTAAATGCTCAAGTAAACATGAAGAAATTGGCATATAATCATCTCTCAACATTAGGAAGCAAATTTCTTGATGGTCCAGTTGATGTGATCTACCCAGGAAGTAAAGTTCCAGAGTGGTTGATGTACAGAACAACAGAGGCTTCAGTGACTGTTGATTTCTCTTCTGCTCCAAAATCTAAGTTTGTTGGTTTCATCTTCTGCGTCGTTGCTGGTCAGCTACCATCAGACGATAAAAATTTCATTGGATGTGATTGTTACTTGGAAACTGGTAATGGCGAAAAGGTCTCCCTTGGAAGCATGGATACATGGACTAGCATACATTCCTCTGAGTTTTTTTCTGACCATATTTTTATGTGGTATGATGAATTGTGTTGCCTGCAAAACAGTAAACCTGAAAAGGAAAACATGGATGAACTCATGGCCAGTTATATTCCAAAGGTTTCATTTGAGTTCTTTGCTCAAAGTGGAAATACTTGGAAAAAGAGGGAGAATAATATGATAAGAGGGTGTGGAGTCTGTCCAATATATGATACAGAATATTTTGATTTCATTAAACAAATGGAATTAGAGTTGGAAATGACATTGCAATCTATAGCAAATGAAAGGTCAGCTCAGTGCAATGATAAGAAAGAAAAACTGGGTCCAAAACAACCATGCAAGAAATTCTTTCCACCCTTTCAAACTGGAATTTGGAAGAGTGCAACACAGGGCTTGAAAGATATATTGTTCTTGTGA 3477 0.377 MASSSSSHVPPVKYDVFISFRGTDIRHGFLSHLRKELRQKQVDAYVDDRLEGGDEISKALVKAIEGSLMSLIIFSKDYASSKWCLEELVKIVECMARNKQVVIPVFYNVNPTDVRHQKGTYGDSLAKHEKNKGSLAKVRNWGSALTIAANLSGFHSSKYGDEVELIEEIVKCLSSKLNLMYQSELTDLVGIEERIADLESLLCLDSTADVLVIGIWGMGGIGKTTLAAAVYNRLCFEYEGSCFMANITEESEKHGMIYLKNKILSILLKENDLHIGTPIGVPPYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQVLGKRVNCTYEAKALQSDDAIKLFIMNAFEHGCLDMEWIELSRRVIHYANGNPLALKVLGSFLYGKSKIEWESQLQKLKKMPHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLDACGFSTIIGLRVLKDKALIIEAKGSGRSIVSMHDLIQEMGWEIVREECVEDPGKRSRLWDPNDVHQVLTNNTGTKAIKSITLNVSKFDELHLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQWVSYPLKSLPQSFCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSKASNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLSGCSRLEDFSVTSDNMKDLALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSGLASLETLKLEECRNLSEIPDNISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVKGCRRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQAYKLHTQFQNCVNLDELSLRAIEVNAQVNMKKLAYNHLSTLGSKFLDGPVDVIYPGSKVPEWLMYRTTEASVTVDFSSAPKSKFVGFIFCVVAGQLPSDDKNFIGCDCYLETGNGEKVSLGSMDTWTSIHSSEFFSDHIFMWYDELCCLQNSKPEKENMDELMASYIPKVSFEFFAQSGNTWKKRENNMIRGCGVCPIYDTEYFDFIKQMELELEMTLQSIANERSAQCNDKKEKLGPKQPCKKFFPPFQTGIWKSATQGLKDILFL* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3486 1158 Gene3D - 180 340 IPR027417 -
Mtr2g3486 1158 SUPERFAMILY "Winged helix" DNA-binding domain 416 524 IPR036390 -
Mtr2g3486 1158 PRINTS Disease resistance protein signature 212 227 - -
Mtr2g3486 1158 PRINTS Disease resistance protein signature 288 302 - -
Mtr2g3486 1158 PRINTS Disease resistance protein signature 380 394 - -
Mtr2g3486 1158 PRINTS Disease resistance protein signature 838 854 - -
Mtr2g3486 1158 Pfam C-JID domain 945 1093 IPR045344 -
Mtr2g3486 1158 ProSiteProfiles TIR domain profile. 12 177 IPR000157 GO:0007165
Mtr2g3486 1158 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 739 1108 - -
Mtr2g3486 1158 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 779 - -
Mtr2g3486 1158 Pfam NB-ARC domain 205 425 IPR002182 GO:0043531
Mtr2g3486 1158 SMART till_3 13 151 IPR000157 GO:0007165
Mtr2g3486 1158 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Mtr2g3486 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Mtr2g3486 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 739 1108 IPR044974 GO:0006952
Mtr2g3486 1158 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 779 IPR044974 GO:0006952
Mtr2g3486 1158 Gene3D - 345 429 IPR042197 -
Mtr2g3486 1158 Gene3D - 12 179 IPR035897 -
Mtr2g3486 1158 Pfam TIR domain 13 190 IPR000157 GO:0007165
Mtr2g3486 1158 SUPERFAMILY L domain-like 578 857 - -
Mtr2g3486 1158 Gene3D Ribonuclease Inhibitor 722 925 IPR032675 -
Mtr2g3486 1158 Gene3D Ribonuclease Inhibitor 512 721 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3486 Mtr-Chr2 48970640 48978217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3486 14 876 WRKY Transcription Factor Family AT4G12020 34.094 4.34e-119 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3486 - - ccaj:109805840 1850.87