Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3480 ATGGGTGCTTCTGGAAAATGGTTTAAATCACTTCTTTCCAATAAGAAATCCGATCAAGAGAAAAAGTGTAGTAGTACTAAGAAGAAATGGAAGATATGGAAAACTTCTTCTTCTTCTTCTTCTTCTTCAACCATCAACAAGACTGTGTCTGATTCTTCCATTACAGATACTGCTGCTGCAGTTGCTGTCGTTGTTCGAGCTGCACCTAAAGATTTCATCCTTATCAGGCAGGAATGGGCTGCTATCCGCATTCAGGCTCTTTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGAGCATTGCGAGCAGTGGTGAGGCTGCAAGCAATATTTAGAGGCAGGCAAGTCAGAAAACAAGCAGCTGTTACTCTAAGGTGCATGCAAGCTCTGGTTAGGGTTCAGGCACGTGTAAGAGCTAGGAATGTGAGGAAATCTCCAGAAGGCAAAGCAGTGCAGCAGCTATTAGATGACCATCGCAACCATGCTGATTCTGCTAAGCTTGTAGAGCAAGGATGGTGTGAAATTCCTGGAACTGCAGATGAAGTTAAAGCAAAGCTAAGAATGAGGCAAGAAGGTGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTATCCACACAGTCAAGAATAAGTGCTAGTCCAAACTCAAAATCCACAAAATCAGTGTCTCTTTTCAAGCATCATCACAACCTTGACAACAAGAGCTTAGGAAATAATTTGTTAGAGCGCTGGATGGCAAACAAACCATGTCCATGGGAGAGTCCAATCTCAAGCAGGAAGAGTGAAGAACTTGTTCCTACTTTTCAATCAAGAAGGAATGGTGTGACAACTAGGATTTCAGCTCTTAAAATCTGTCAGCAAACTCCATCATCTTCGACTTTAAGCTCCGAATACATGAATGATGATAGCATTTTATCAACTTCATGTACATCTGGATCTCCATCTATGCCAGAAGCAACAGAGGAAAAAGATGCTCACCTGCCTAGCTACATGAATTTGACAGAATCAACTAAGGCTAAGCTCAAAACTTACAGGTCTTCTTCGCAGAGTTCGAAGAGACTCGTAATGGATGATTGTATGTCTCATAACACAAGTACAACTTTTCTGAATGGAGATAATAGTATAAATAGTTCTGGTTCTGAACCTTCAGTTAATTTATGGAAGGATCATTGTGCAACACCTCTAAGGGCAAGTTATTATCAAAAACGATATGGCAGGAGATAG 1221 0.4152 MGASGKWFKSLLSNKKSDQEKKCSSTKKKWKIWKTSSSSSSSSTINKTVSDSSITDTAAAVAVVVRAAPKDFILIRQEWAAIRIQALFRAFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQARVRARNVRKSPEGKAVQQLLDDHRNHADSAKLVEQGWCEIPGTADEVKAKLRMRQEGAIKRDRAMAYSLSTQSRISASPNSKSTKSVSLFKHHHNLDNKSLGNNLLERWMANKPCPWESPISSRKSEELVPTFQSRRNGVTTRISALKICQQTPSSSTLSSEYMNDDSILSTSCTSGSPSMPEATEEKDAHLPSYMNLTESTKAKLKTYRSSSQSSKRLVMDDCMSHNTSTTFLNGDNSINSSGSEPSVNLWKDHCATPLRASYYQKRYGRR* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3480 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 119 IPR027417 -
Mtr2g3480 406 Pfam IQ calmodulin-binding motif 101 118 IPR000048 GO:0005515
Mtr2g3480 406 Pfam IQ calmodulin-binding motif 79 98 IPR000048 GO:0005515
Mtr2g3480 406 SMART iq_5 76 98 IPR000048 GO:0005515
Mtr2g3480 406 SMART iq_5 99 120 IPR000048 GO:0005515
Mtr2g3480 406 Gene3D - 74 125 - -
Mtr2g3480 406 ProSiteProfiles IQ motif profile. 101 128 IPR000048 GO:0005515
Mtr2g3480 406 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 404 - -
Mtr2g3480 406 PANTHER IQ-DOMAIN 5-RELATED 1 404 - -
Mtr2g3480 406 MobiDBLite consensus disorder prediction 1 28 - -
Mtr2g3480 406 ProSiteProfiles IQ motif profile. 77 105 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3480 Mtr-Chr2 48925859 48928909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3480 1 388 IQD Protein Family AT1G72670 46.081 1.31e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3480 - - mtr:MTR_2g099780 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3480 2 48925859 48928909 Mtr8g0507 8 6016563 6020330 PCT