Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3476 ATGGAACCTCGTATTGGTAACAAGTTCCGTCTTGGCCGCAAAATTGGTAGCGGATCCTTCGGCGAGATCTATCTCGGTACAAATATTCAGACAAATGAAGAGGTTGCAATTAAGCTTGAAAATATCAAAACCAAGCATCCTCAGTTGTTGTACGAATCAAAGTTGTATAAAGTACTTCAAGGCGGAACTGGTATCCCGAATGTGAGATGGTTTGGCGTAGAAGGAGAGTACAATGTTCTTGTAATGGATTTACTAGGACCAAGTCTCGAGGATTTATTCAGTTTTTGTAGTCGGAAATTGTCCCTTAAAACTGTACTCATGCTTGCTGATCAGATGATAAATCGAGTTGAATATATTCATTCCAAATCATTTTTACATAGGGACATCAAACCAGACAACTTCCTCATGGGTCTGGGGAGGCGAGCTAATCAAGTGTATGCCATTGACTTCGGTCTTGCTAAAAAATACAGGGACACCTCTACCCATCAGCATATACCTTACAGAGAGAATAAGAACTTGACAGGAACTGCTAGATATGCTAGTATGAATACGCATCTTGGAATTGAGCAAAGCCGTAGGGACGACTTAGAATCACTTGGATATGTTCTTATGTACTTTCTGAGAGGAAGCCTTCCATGGCAGGGATTAAAAGCAGGTACTAAAAAGCAGAAGTACGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCCTTGTGTCGTGGCTACCCCTCAGAATTCGCTTCGTACTTCCATTACTGTCGGTCATTGCGGTTTGATGATAAACCAGATTATGCATATCTGAAAAGGCTGTTTCGCGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTCGATTGGACCATTTTGAAGTATCAGCAATCTCAAATTGCCACTCCTTCTGCACGTGCCATTGGTTCTGGTGCTGGGCCAAGTTCTGGATTACCACCAGCTGTTGTGAGTGCTGAGAGACCATCAGGTGGGGAAGATGGTAGACATGCTGGTTGGTCTTCATCAGATCCTGCTCGTAGAAGAAACTCTGGACCTATTGCAAATGATGGAAACTTGTCTAGACAAAAAGCCCCGGTACCAAGTGACTCAAATGGATCTAAAGAAGTTATGTTGTCTAGTTCTAATTTCTTCCGGCCTAGTGGATCTACAAGACGAGTAGGTGCTGTTTCCAACAGTCGTGATGCAGTTGTTAGCAGTGAAATTGAACCCTCTCTTCCTCTTGCCAGGGATGGTAGTCCTGGAGCACTCCTTAAAACCTCTGGTGCTCAAAGAAATTCACCTATCACATCATCGGAGCACAAAGCAACCACATCTTCTGGCAGAAACACATCGAACATGAAGAATTTTGAGTCAACTATCCGAGGTATTGAGAGCCTGAATTTCAATGACGAGAAGGTACAGTATTAG 1428 0.4258 MEPRIGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENIKTKHPQLLYESKLYKVLQGGTGIPNVRWFGVEGEYNVLVMDLLGPSLEDLFSFCSRKLSLKTVLMLADQMINRVEYIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIATPSARAIGSGAGPSSGLPPAVVSAERPSGGEDGRHAGWSSSDPARRRNSGPIANDGNLSRQKAPVPSDSNGSKEVMLSSSNFFRPSGSTRRVGAVSNSRDAVVSSEIEPSLPLARDGSPGALLKTSGAQRNSPITSSEHKATTSSGRNTSNMKNFESTIRGIESLNFNDEKVQY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3476 475 MobiDBLite consensus disorder prediction 425 455 - -
Mtr2g3476 475 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mtr2g3476 475 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3476 475 MobiDBLite consensus disorder prediction 343 375 - -
Mtr2g3476 475 MobiDBLite consensus disorder prediction 411 455 - -
Mtr2g3476 475 PANTHER CASEIN KINASE-RELATED 1 460 - -
Mtr2g3476 475 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Mtr2g3476 475 MobiDBLite consensus disorder prediction 306 375 - -
Mtr2g3476 475 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3476 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr2g3476 475 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mtr2g3476 475 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 460 IPR030509 GO:0004672|GO:0005524
Mtr2g3476 475 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3476 475 MobiDBLite consensus disorder prediction 380 399 - -
Mtr2g3476 475 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3476 Mtr-Chr2 48851762 48857166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3476 7 223 EF-hand Containing Proteins AT2G17890 26.667 8.25e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr2g3476 Pkinase 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3476 K02218 - gmx:100778165 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3476 2 48851762 48857166 Mtr8g0526 8 6250585 6255892 PCT