Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3466 ATGGCTTCAAATGGAGAAGAAGAATCCTCCACCGTGATCGCCATTGATTCAGACAAGAACAGCCAACACGCTGTAAAGTGGGCCGTTGATCACCTTTTGGACAAATACGCGTCATGCACCCTCATTCACGTTAGAACCAAGCCCTTCAATTCAAATGAATTTGATGCTATCCCTAAACAAGGTCGTCCACCTACCGAAGAAGAATTGCATCAGTTCTTTCTCCCCTTCCGAGGATTTTGTGCTCGAAAAGGGATCATAGCTGAGGAGTTGGTCCTGCATGACATTGACGTTCCAAGTGCACTTACTGATTACATCATCGACAACTCTATCACCGACGTTGTTCTTGGTGCTCCCCGTTGGAATAACGCTTTTATAAGGAAATTTAAAGATGTAGATGTGCCAACAAGTTTAGTGAAGTCTCTACCAGAGACTTGCACGGTGCATATTATATCAAGAGGAAAAGTCCAGAGTATTCAAGCAACAGCTCCTTCCCAAACCATTACTATTTCTAGTCCAAAGCCAGATTATTTGACCAAAGACTTAAACAGAAAATCACTCAATAAAATAAGGAGGCGCTTAAGCAGCGATGGTGGATCCTTTGGTCAAAAAAAGGATGCAAGAATAGGATCAAGATGTATGTCCCAAAGAGAGACTTATCCACGGAGGATATCCCTATCAGATGACAACCAAGATTCGAATAGCATGGAGACAGAAATAAACAGATTAAAACAAGAGCAGAAGAGAACAAAAAAGAAGAGTAGGTCAGCGTCAGTTGGTAGAGAAGCTGGTTTCGCGAAACAGAAGGTAATTAATGTGCATGAAGAAGATGAAGAAGAAAGAATGACAACATCAAATGAAATTGAACGCAACAAATTTATATTTAAAAGATACAATATTGAAGAAATTGAAGTTGCAACAAATTACTTTGATATGGATGGCAAAATTGGTGAAGGTGGATATGGACCTGTTTTCAAAGGAGTACTTGACAACACTGATGTTGCAGTTAAAGCCTTAAGACCAGATATGACTCAAGGGGAGAAACAATTTAATCAAGAGGTCCTTGTTTTAGGCTCCATAAGACATCCCAACATTGTAGTACTTTTAGGGGCCTGTCCGGAGTTCGGATGCCTCATATACGAGTACCTAGACAACGGAAGCTTAGAAGATCGTCTTTTCCAAAGAGACAACACGCCACCAATTCCATGGAAGACTCGATTCAAAATAGCATCAGAGATTGCGACAGGCCTTCTTTTCCTTCACCAGACAAAACCAGAACCGGTTGTGCATCGCGATCTCAAACCAGCAAACATTCTCTTAGACAGAAACTACGTAAGCAAGATCAGCGATGTTGGTTTGGCAAGGCTTGTTCCACCTTCTGTAGAAAACAAAACTACCGAATATCACAAGACAAATGCAGCCGGAACATTTTTTTATATTGATCCGGAGTATCAACAAACAGGACTATTGGGCGTAAAATCAGACATATATTCATTAGGTGTTATGCTTCTACAAATCATTACTGGAAAGACTCCAATGGGTGTTGCTCACCTTGTTGAGGAGGCCATTCAGAATGATAATCTTGCAAAGGTGCTTGATCCGAATGTGACTGATTGGCCGGTCGAAGAGGCTTTATCACTTGCTAAATTAGCTTTGAAGTGTTGTGAGATGAAAAAAAAGGATAGACCAAGTCTTGCTTCTGTCATTTTGCCAGAACTAAAAAGACTCAGAGATCTATAA 1737 0.4076 MASNGEEESSTVIAIDSDKNSQHAVKWAVDHLLDKYASCTLIHVRTKPFNSNEFDAIPKQGRPPTEEELHQFFLPFRGFCARKGIIAEELVLHDIDVPSALTDYIIDNSITDVVLGAPRWNNAFIRKFKDVDVPTSLVKSLPETCTVHIISRGKVQSIQATAPSQTITISSPKPDYLTKDLNRKSLNKIRRRLSSDGGSFGQKKDARIGSRCMSQRETYPRRISLSDDNQDSNSMETEINRLKQEQKRTKKKSRSASVGREAGFAKQKVINVHEEDEEERMTTSNEIERNKFIFKRYNIEEIEVATNYFDMDGKIGEGGYGPVFKGVLDNTDVAVKALRPDMTQGEKQFNQEVLVLGSIRHPNIVVLLGACPEFGCLIYEYLDNGSLEDRLFQRDNTPPIPWKTRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYVSKISDVGLARLVPPSVENKTTEYHKTNAAGTFFYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKTPMGVAHLVEEAIQNDNLAKVLDPNVTDWPVEEALSLAKLALKCCEMKKKDRPSLASVILPELKRLRDL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3466 578 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 120 - -
Mtr2g3466 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Mtr2g3466 578 MobiDBLite consensus disorder prediction 217 237 - -
Mtr2g3466 578 CDD STKc_IRAK 315 575 - -
Mtr2g3466 578 SMART serkin_6 309 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3466 578 Pfam Protein kinase domain 311 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3466 578 MobiDBLite consensus disorder prediction 161 175 - -
Mtr2g3466 578 MobiDBLite consensus disorder prediction 161 180 - -
Mtr2g3466 578 ProSiteProfiles Protein kinase domain profile. 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3466 578 MobiDBLite consensus disorder prediction 238 257 - -
Mtr2g3466 578 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 274 578 - -
Mtr2g3466 578 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 10 277 - -
Mtr2g3466 578 CDD STK_N 10 153 - -
Mtr2g3466 578 PANTHER OS02G0152300 PROTEIN 274 578 - -
Mtr2g3466 578 PANTHER OS02G0152300 PROTEIN 10 277 - -
Mtr2g3466 578 Gene3D HUPs 10 128 IPR014729 -
Mtr2g3466 578 Coils Coil 225 252 - -
Mtr2g3466 578 Pfam Universal stress protein family 12 122 IPR006016 -
Mtr2g3466 578 SUPERFAMILY Protein kinase-like (PK-like) 288 568 IPR011009 -
Mtr2g3466 578 Gene3D Phosphorylase Kinase; domain 1 277 381 - -
Mtr2g3466 578 MobiDBLite consensus disorder prediction 192 261 - -
Mtr2g3466 578 Gene3D Transferase(Phosphotransferase) domain 1 382 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3466 Mtr-Chr2 48787115 48789816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3466 266 578 Receptor kinase-like Gene Family AT5G12000 64.537 1.97e-146 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr2g3466 Pkinase 7.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3466 - - gmx:100802306 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0553 8 6549429 6554174 Mtr2g3466 2 48787115 48789816 PCT