Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3463 ATGGAAGGTCGAAGTCGCACCGTTGAGCAAATTTTTGATGATTTCAAGAGCCGAAGAACTGGAATCATCAAAGCCCTAACCGTCGATGTTGAAGATTTCTACCGACAATGTGATCCTGAAAAGGAGAATTTGTGCTTGTATGGATTGCTTAATGAGAATTGGGAAGTGAATTTACCTGTTGAAGAAGTTCCTCCAGAGATTCCTGAACCTGTGCTGGGTATCAACTTTGCCAGGGATGGAATGCAAGAGAAAGACTGGTTAGCCTTAGTTGCTGTTCACAGTGATACATGGTTACTTTCCCTTGCATTCTACTTTGGAGCCAGATTTGGATTTGATAAAGCTGACAGGAAACGTCTATTCAATTTGATCAATGAACTGCCAACAGTATTTGAAGTTGTTACTGGTGCTGCAAAGAAACAAGTCAAAGAGAAGTCTTCAGTCTCAAACAACAGTGGCAGCAAATCTAAGTCCAGTTCTAAAGCGCGAGCTCCTGAGGCTCAGAGCAGACAACCAAAAGCGGCATTACTGCCAAAAGATGAGGAGGAGGAACTGGAAGAGCAGGATGATGATGAACAGGGAGAAGCCACTTGCGGGGCTTGTGGTGATAGTAATGGAGCTGATGAGTTCTGGATTTGCTGCGACATCTGCGAGAAGTGGTTCCATGGAAAATGTGTGAAGATCACTCCTGCTCGTGCCGAGCATATCAAGCAATACAAGTGCCCATCATGCAGCAGTAACAAGAGAGCTCGCTAG 753 0.4475 MEGRSRTVEQIFDDFKSRRTGIIKALTVDVEDFYRQCDPEKENLCLYGLLNENWEVNLPVEEVPPEIPEPVLGINFARDGMQEKDWLALVAVHSDTWLLSLAFYFGARFGFDKADRKRLFNLINELPTVFEVVTGAAKKQVKEKSSVSNNSGSKSKSSSKARAPEAQSRQPKAALLPKDEEEELEEQDDDEQGEATCGACGDSNGADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSSNKRAR* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3463 250 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 1 250 - -
Mtr2g3463 250 MobiDBLite consensus disorder prediction 141 193 - -
Mtr2g3463 250 SUPERFAMILY FYVE/PHD zinc finger 186 246 IPR011011 -
Mtr2g3463 250 MobiDBLite consensus disorder prediction 141 165 - -
Mtr2g3463 250 Pfam Alfin 7 135 IPR021998 GO:0006355|GO:0042393
Mtr2g3463 250 Pfam PHD-finger 197 245 IPR019787 -
Mtr2g3463 250 PANTHER CPG BINDING PROTEIN 1 250 IPR045104 GO:0006355|GO:0042393
Mtr2g3463 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 245 IPR013083 -
Mtr2g3463 250 SMART PHD_3 196 244 IPR001965 -
Mtr2g3463 250 ProSitePatterns Zinc finger PHD-type signature. 197 243 IPR019786 -
Mtr2g3463 250 CDD PHD_AL_plant 197 246 IPR044104 -
Mtr2g3463 250 ProSiteProfiles Zinc finger PHD-type profile. 194 246 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3463 Mtr-Chr2 48773675 48777548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3463 6 250 Alfin-like Transcription Factor Family AT3G42790 72.245 4.28e-118 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Mtr2g3463 Alfin 5.6e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3463 - - gmx:100170700 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0571 8 6828414 6832847 Mtr2g3463 2 48773675 48777548 ECH
Mtr2g3463 2 48773675 48777548 Mtr2g3463 2 48773675 48777548 ECH
Mtr2g3463 2 48773675 48777548 Mtr8g0571 8 6828414 6832847 PCT