Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3447 ATGTACCCTAAAGAGAATCAAAATATGGAGATAAGTCCTTACAATACTTCAAAGAAAACAAAGCACTTGGAGAAGTTGAACCATCAAAATAATAGCTATTTTCTTCATGAAGCTTCAACCATAGACATGATGCATACATCATCAAGCAATCATCAAACATCTTCAGATAATTCTAGTGAGACATGTCATCGTGATCAAGATGGTAAATGGTCCTCCAAACTTCTCAAAGAGTGTGCAATAGCAATATCTAATAGAGACTCATCAAAAATCCACCATCTTCTTTGGATGTTAAACGAGTTATCTTCACCTTATGGAGATATTGATCAAAAACTAGCTTCATATTTTCTACAAGCTCTATTTTCCAAGGCAACACAATCCGGTCACAAGTGTTACAAAACACTATCTTCAATCGCTTACAAAAGCCACTCTTTTGATTCAGCAAGAAAGTTAATACTCAAGTTTCAAGAGGTAAGTCCATGGACAACTTTTGGACACGTAGCATCAAATGGTGCTATTTTAGAAGCTTTAGATGGAGAGAAAAAACTTCACATAATTGATATTAGCAACACCCTTTGTACTCAATGGCCTACTCTTCTAGAAGCTTTGGCAACAAGAAATGATGAAACTCCTCACCTTAAGCTCACAATTGTTGTCACAAATAATAGTTCTAGTGTTGTTGTTATGAAGGAAGTTGGTCAAAGAATGGAGAAATTTGCTAGGCTTATGGGAGTACCTTTTGAATTGAATGTTATTAGTGATTTGAAACATATACGAGAATTAACAAAAGAGAGGTTAGGAATTCAAGAAGGTGAAGCAATAGCTTTGAATTGTGTTGGAGCATTGAGAAAAGTTGAAGTTGAAGAAAGAGAAAGTGTGGTTCAATTTTTCAAATCGCTTAGTCCTAGAGTTGTGACATTTGTTGAGGAAGAAGGTGATTTTTGTAGTGATGATTTTGTTAAATGTTTTGAAGAGTGTCTTAAGTTTTATAGAATTTATTTTGAGATGTTAGAGGAGAGTTTTCCACCAACAAGTAATGAGAGGTTAATGTTGGAAAGGGAGTGTTCAAGAAGCATAGTTAGGGTTTTGGCTTGTGATCATGAATTTGATCATGATGAAGATGATGGTGGTGGTGATTATTGTGACAAAAGGGAGAGAGGAAAACAATGGTTTGAAAGGTTTAAGAATGAATTTTCACCTTGTGGATTTAGTGATGATGTTGTGGATGATGTCAAAGCATTGCTAAAGAGGTATCAAGCTGGTTGGTCACTTGTTGTACCTCAAGGAGATGATCATATTACAGGAATGTACCTAACATGGAAGGAGGAGCCAGTTGTTTGGGCATCAACATGGAAACCCTAG 1359 0.3576 MYPKENQNMEISPYNTSKKTKHLEKLNHQNNSYFLHEASTIDMMHTSSSNHQTSSDNSSETCHRDQDGKWSSKLLKECAIAISNRDSSKIHHLLWMLNELSSPYGDIDQKLASYFLQALFSKATQSGHKCYKTLSSIAYKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGEKKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTIVVTNNSSSVVVMKEVGQRMEKFARLMGVPFELNVISDLKHIRELTKERLGIQEGEAIALNCVGALRKVEVEERESVVQFFKSLSPRVVTFVEEEGDFCSDDFVKCFEECLKFYRIYFEMLEESFPPTSNERLMLERECSRSIVRVLACDHEFDHDEDDGGGDYCDKRERGKQWFERFKNEFSPCGFSDDVVDDVKALLKRYQAGWSLVVPQGDDHITGMYLTWKEEPVVWASTWKP* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3447 452 ProSiteProfiles GRAS family profile. 62 451 IPR005202 -
Mtr2g3447 452 PANTHER PROTEIN SHORT-ROOT-LIKE 42 451 - -
Mtr2g3447 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 451 IPR005202 -
Mtr2g3447 452 MobiDBLite consensus disorder prediction 45 65 - -
Mtr2g3447 452 Pfam GRAS domain family 73 451 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3447 Mtr-Chr2 48592310 48594091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3447 67 452 GRAS Transcription Factor Family AT4G37650 51.358 3.69e-143 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g3447 GRAS 1.9e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3447 - - gmx:100818806 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3447 2 48592310 48594091 Mtr2g3447 2 48592310 48594091 ECH
Mtr8g0619 8 7301849 7304061 Mtr2g3447 2 48592310 48594091 PCT