Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3443 ATGGAAAAGGACAAATCTTTGGGTCTTGGCGGTGGTTTTCCACCTCCATCAGGACGTTATCCGGGTTATTCACCATCTGGAAGTGGTTTCAATGTGAAATCTGAACCCCCATCATCGTCCTATCCGCCGCTTGTTCCTGGAACCAGCTCAGATTCTAGTGGCTTTAGTCATGATATAAGTAAAATGTCTGATAATCCTCCAAGAAATAGAGGTCATAGACGTGCTCATTCCGAGATTCTTACCTTGCCGGATGATATTAGCTTTGATAGTGATCTTGGTGTAGTTGGTGGTGCTGATGGACCGTCGTTCTCTGATGATACTGAGGAAGATTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCTTCAGCTACGTCTAATTTTCAAATGGGTGAGGGGTCTAATGCTGCCGGAGCATCGGGTTTGGCGCCAATGTCGGTAGGGCAGACATCAGGAGGAGGTACCTCTTCTGGGGAAAATATGGCAGTTGGTACTACAAATGAAAGGCCCAGAATCAGACACCAGCATAGCCAGTCCATGGATGGGTCAACAACAATCAAACCTGAGATGTTAGTCTCGGGTTCAGATGACATGTCCGCAGCTGATTCCAAAAAAGCAATGTCAGCGGCCAAGCTTGCAGAACTTGCCTTGATTGACCCCAAGCGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCGGCTAGGTCAAAAGAGAGGAAGATGCGCTATATTGCCGAGCTTGAAAGAAAAGTGCAGACATTGCAAACGGAAGCAACATCTTTGTCTGCACAGTTAACTCTCTTACAGAGAGATACAAGTGGACTGAATTCTGAGAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAGGATGCTTTAAATGACGCGTTAAAAGAGGAAATCACGCATTTGAAAGTACTGACTGGGCAAGCTATGCCACCAAATGGAGGACCTATGAACTTAGCTTCTTTTGGAGGAGGGCAACAGTTCTATCCCAATAATAATCATGCCATGCACACTCTTTTGGCTGCACAACAGTTTCAACAGCTCCAAATTCATCCACAGAAACAGCAGCAACATCAGTTTCAGCAACAAATACAACAGCAACAACAAATACAGCAGCAACAAATGCAACAGCAACAAATGCAGCAGCAGCAGCAGGAACAACAACAATCAGGTGACTTGAAAATGAGAGCAACTACACCTCCATGCCCGAAAGATAATCCTTCATCGGATGTAAATCCTTCGGCAACCAAGGATTGTTGA 1290 0.4535 MEKDKSLGLGGGFPPPSGRYPGYSPSGSGFNVKSEPPSSSYPPLVPGTSSDSSGFSHDISKMSDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSNFQMGEGSNAAGASGLAPMSVGQTSGGGTSSGENMAVGTTNERPRIRHQHSQSMDGSTTIKPEMLVSGSDDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTSGLNSENSELKLRLQTMEQQVHLQDALNDALKEEITHLKVLTGQAMPPNGGPMNLASFGGGQQFYPNNNHAMHTLLAAQQFQQLQIHPQKQQQHQFQQQIQQQQQIQQQQMQQQQMQQQQQEQQQSGDLKMRATTPPCPKDNPSSDVNPSATKDC* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3443 429 Coils Coil 378 400 - -
Mtr2g3443 429 Gene3D - 222 294 - -
Mtr2g3443 429 MobiDBLite consensus disorder prediction 412 429 - -
Mtr2g3443 429 MobiDBLite consensus disorder prediction 27 62 - -
Mtr2g3443 429 MobiDBLite consensus disorder prediction 385 405 - -
Mtr2g3443 429 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Mtr2g3443 429 MobiDBLite consensus disorder prediction 146 166 - -
Mtr2g3443 429 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 378 - -
Mtr2g3443 429 MobiDBLite consensus disorder prediction 132 188 - -
Mtr2g3443 429 CDD bZIP_plant_RF2 224 273 IPR044759 GO:0003700|GO:0006355
Mtr2g3443 429 SUPERFAMILY Leucine zipper domain 223 274 IPR046347 GO:0003700|GO:0006355
Mtr2g3443 429 Pfam bZIP transcription factor 223 281 IPR004827 GO:0003700|GO:0006355
Mtr2g3443 429 Coils Coil 239 308 - -
Mtr2g3443 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
Mtr2g3443 429 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 378 - -
Mtr2g3443 429 MobiDBLite consensus disorder prediction 1 76 - -
Mtr2g3443 429 MobiDBLite consensus disorder prediction 385 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3443 Mtr-Chr2 48536654 48540668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3443 19 352 bZIP Transcription Factor Family AT1G06070 73.810 1.84e-168 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr2g3443 bZIP_1 2.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3443 - - gmx:100786738 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3443 2 48536654 48540668 Mtr2g3443 2 48536654 48540668 ECH