Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3435 ATGGAGATTGAGATCTATGACTCTGGTAATGGTGAGGCGCTAGGAAATGCTACTATTGGAGAGGTCGGTAGTAGCATAGCTAACAAAGAAATAGTTGAATGCAGTTCTTTTGATCCAACTGATGAGCAGGATCAAGATGATACTATGACTCAAGATTCTTCTGGAGTGGACCAAATCGCCTCAGCAGTTCCTGTAACATCGGTTATGAGAACAATTGATGAACCCTATATCGGTCAGGAGTTTGTATCCGAAGCAGAAGCACATGCATTTTATAATTCATATGCTACACGTGTTGGATTCGTCATACGTGTAAGTAAGCTCTCGAGATCAAGGCGCGATGGATCTGTTATTGGACGGGCTCTAGTTTGCAACAAAGAAGGTTTCAGAATGCCTGACAAGCGTGAAAAGATTGTAAGGCAAAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAATTAAATTCTGGTCTATGGTCTATAACAAAGTTTGTAAAAGAGCACACACATCCTCTGACACCTGGAAGAGGCAGAAGGGACTTCGTTTATGAGCAATATCCGAGTGGACACGACAGAGTTCGAGAACTAACTCAACAGTTGGCTATAGAGAAAAAGCGAGCTGAAACCTATAAAAGGAACCTTGACCTGTTATATGAGTGCATCGAGGAGCATAATGAAGCCGTCTCAAAGAAGATACAGCACATAGTAGAGAGTGTGAAGGAGATGGAAGCTAAAGAACAAGAGAGTCAGTTTCAATTGGCTGTTATCTAG 780 0.4244 MEIEIYDSGNGEALGNATIGEVGSSIANKEIVECSSFDPTDEQDQDDTMTQDSSGVDQIASAVPVTSVMRTIDEPYIGQEFVSEAEAHAFYNSYATRVGFVIRVSKLSRSRRDGSVIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHPLTPGRGRRDFVYEQYPSGHDRVRELTQQLAIEKKRAETYKRNLDLLYECIEEHNEAVSKKIQHIVESVKEMEAKEQESQFQLAVI* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3435 259 Coils Coil 196 216 - -
Mtr2g3435 259 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 251 - -
Mtr2g3435 259 Pfam FAR1 DNA-binding domain 90 176 IPR004330 -
Mtr2g3435 259 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3435 Mtr-Chr2 48466754 48470849 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g3435 FAR1 1.9e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3435 - - gmx:100806900 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3435 2 48466754 48470849 Mtr2g3435 2 48466754 48470849 ECH
Mtr2g3435 2 48466754 48470849 Mtr4g1998 4 33537671 33541160 PCT