Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3407 ATGGATTCTTCTATTATTATGGCTAACACAATTCAAGACCCTAATAATGAAATGGAATTTGAATCACATGAAGCTGCGTATTCATTTTACAAAGAATATGCAAAATCAGCAGGGTTTGGTACTGCTAAGTTAAGTAGCCGCCGATCTAGGGCATCGAAAGAATTCATCGATGCGAAATTTTCGTGTATTAGATATGGTAATAAACAGCAATCCGATGACGCGATTAATCCGCGTCCTTCCCCGAAAATCGGTTGTAAAGCAAGTATGCATGTAAAGAGAAGACAGGATGGTAAATGGTATGTTTATAGTTTTGTTAAGCAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTTTTTCGGAGTCATAGGAATAATGATCCGTTAAGTAATGATGTTAGGATGAGACGGAGGAAGAATTCGACTGCAGGTGGTGGTAAGTTGTTTAGCGCGTATCAGAATATTGATTGTTTGGAGAATTTGATGAATCGTCAACAAGATAAAGGTCGGAGTTTGGTTTTAGAACCGGGGAATGCTCAATTGCTTCTTGAATTGTTTATGCATATGCAGGAAGAGAATCCGAAATTCTTTTATGCCATTGATTTGAATGAAGAGCATCGACTTAGAAATGTGTTTTGGGTTGATTCTAAAGGGTTGGAAGATTTTGGTTATTTTTCTGATGTTGTTTCTTTTGACACAGCGTATTTCACAAGCAAGTATAAGATACCGTTGGTGCTTTTTGTTGGAGTTAACCATCATGTTCAACCAACATTGCTTGGATGTGCATTGATAGCTGATGAGACTGTGTTTACCTTTGCATGGTTATTGCAAACATGGTTTGTAGCAATGGGGGAACGTGCTCCGCAAGTGATTCTAACTGACCAAAATGATGCTATTAAAGCTGCTGTTGCTGCTGTTTTTCCTGGAACGCGTCATTGTTTTTGTTTGTGGCATGTTTTGGAAAAGATACCGAAACAACTTGAGTTCTTAAGTACATGGCATGATAGCTTTATGGAAAAGTTCAACAAGTGTATATATCAATCATGGACAGAAGAGCAATTTGAAAAGAGATGGTGGAAGCTGGTTGATAGGTTTAAACTTAGAGATGTTAAGTGGGTTCAAACCTTGTATGATGATCGTGCATGTTGGGTGCCAACGTTTATGAAGGATATTTCTCTTGCTGGCTTGTCTACTGGCTCGCGCTTTGAAAGTTTAAATTCTATTTTTGACAAATATATCCAAGTTGATACTTCATTAAGACAATTTATAGATCAGTACCAACTGATTCTTGAAGATAGAGATGAAGAGGAAGCCAAAGCAAATTTTGATGCCTGGCATGAAACACCTGAATTAAAGTCACCTTCCCCTTTCGAAAAACAACTGTTGTTAGTTTATACTCATGAAATCTATCAAAAGTTTCAGTTCGAGGTTTTGGGTGCTTCTGCTTGCCATCTAAAGAAAGAAAATGATGGTGTGATTACTACTTATGATGTGAAAGACTTCGAAAATAATCAGAACTACATGGTAGAATGGAACACATCAAACTCGGATATATGTTGTTCCTGTCACTTGTTTGAATATAAAGGTTACCTATGTAGACATGCAATTGTTGTTCTACAAATGTCTGGTGTTTTTAGCATCCCGCCAAAGTATATATTGAAAAGATGGACAAATGTTGCTTTAAGTAGGTATCCTATTGGTGAAAACTTGGAAGAGGTTCAATCCAAGGTCCGGAGATTAAATGATTTATGTAGACGAGCCATAATATTGGGTGAAGAAGGTTCTTTATCCCAAGAAAGTTACTATATGGCTTTAGGTTCCTTAAGTGAAGCTCTAAAGCAATGTGCAAATTTGAACAACTCTGTTGACAATTCAGCCTTGGCTACCCATATTAGTTGCAATGGTGAAGAAGGGTATCAATCTATTACACCATCTAATGATAAGGTCTCCGATCCGAAATTGAATACGAGTAAGAAGGCTGCAAGGACTGGTGTAGCTGGTAGGAGTCCAGGAGGTGTTGAAGGAAAGGGAAAGGTGCCTCAGCTTGGAGCAGTAAGTGGTAGTAACGATGGCTTTCAACAATTGGAGCATACTGATATAAGGTCACATAATGTCATGCCAATGCAGTTTAACAGCATGGTGCCGGCGGCTATGTTCAATAATGTTTCGTCCCCCTTTCACACTGCTACCTCAACTCATTTGCATGACAATCATCTTCCTCCATAG 2226 0.3836 MDSSIIMANTIQDPNNEMEFESHEAAYSFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKQHNHELLPAQAHFFRSHRNNDPLSNDVRMRRRKNSTAGGGKLFSAYQNIDCLENLMNRQQDKGRSLVLEPGNAQLLLELFMHMQEENPKFFYAIDLNEEHRLRNVFWVDSKGLEDFGYFSDVVSFDTAYFTSKYKIPLVLFVGVNHHVQPTLLGCALIADETVFTFAWLLQTWFVAMGERAPQVILTDQNDAIKAAVAAVFPGTRHCFCLWHVLEKIPKQLEFLSTWHDSFMEKFNKCIYQSWTEEQFEKRWWKLVDRFKLRDVKWVQTLYDDRACWVPTFMKDISLAGLSTGSRFESLNSIFDKYIQVDTSLRQFIDQYQLILEDRDEEEAKANFDAWHETPELKSPSPFEKQLLLVYTHEIYQKFQFEVLGASACHLKKENDGVITTYDVKDFENNQNYMVEWNTSNSDICCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYILKRWTNVALSRYPIGENLEEVQSKVRRLNDLCRRAIILGEEGSLSQESYYMALGSLSEALKQCANLNNSVDNSALATHISCNGEEGYQSITPSNDKVSDPKLNTSKKAARTGVAGRSPGGVEGKGKVPQLGAVSGSNDGFQQLEHTDIRSHNVMPMQFNSMVPAAMFNNVSSPFHTATSTHLHDNHLPP* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3407 741 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
Mtr2g3407 741 SMART 26again6 518 545 IPR006564 GO:0008270
Mtr2g3407 741 ProSiteProfiles Zinc finger SWIM-type profile. 507 543 IPR007527 GO:0008270
Mtr2g3407 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 701 IPR031052 GO:0006355
Mtr2g3407 741 Pfam MULE transposase domain 228 321 IPR018289 -
Mtr2g3407 741 Pfam SWIM zinc finger 513 541 IPR007527 GO:0008270
Mtr2g3407 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 2 701 - -
Mtr2g3407 741 MobiDBLite consensus disorder prediction 642 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3407 Mtr-Chr2 48116280 48121014 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g3407 MULE 2.6e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3407 - - gmx:100805273 1256.89