Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3405 ATGGATTCACCAACATCACCTAGTACACAAGACCTTAACCTCAACAACCTCAAACCACTCAAAATCTTAGGCAAAGGAGCAATGGGAACCGTTTTCCTCATCCAACAAAACAACAACGTTAACACCACCATGGCACTCAAGGTAGTCGATAAATCCTCCACACATCAAGCCGAACGTCGAGCCCGTTGGGAGATCGACGTCTTATCAACTTTATCACATCCATTTCTCCCTTCCTTCCTGGGCAACTTTGAAACGGCTCAGTTAATCGGATGGGCCGTTCCATATTGCCCAGGAGGTGATCTAAACGCGCTCCGTTACCAACAAACGGACCGCGTCTTCTCAATAACAGCAATCCATTTCTACATAGCAGAGATTCTCTGCGCTCTTCAACATCTTCATACCATGGGCATAGCTTATCGTGACCTTAAACCTGAAAACGTTCTTATTCAACAATCTGGCCACGTCACCTTAACTGATTTCGATCTCTCACGTAAACTTTCACACAAAACAGTTAGAACTTTAACCGTTGAAGATAACAGAATCCACGAATCTCAACGCAAAACTCGGCGATGGAGAATTCCACTCAATCGTCGAATTAGTCCGGTGAGTCGTCGTGGATTGAGTTTCTCCGACGGTGAAAAGTCTAACTCGTTTGTTGGCACAGCAGAGTACGTCGCCCCGGAAGTAATCCGCGGCGAAGGACATGAATTTGCAGTTGATTTTTGGGCTCTTGGAATTTTAAGCTACGAGATGCTGTATGGGAAAACACCGTTTAAAGGGAAGAACAAGAAAGAAACTTTTTCAAACGTGCTTTTCAAGAAGCTTGAATTTTTTGGAAGGAAAACGGCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCGTTGAAGCGTTTGGGTTATGTTGGTGGTGCTGAAGAGATAAAAGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGCTGACGGAGGTGGAACGGCCACCGTTTATTCCGTCGAGAGGAGATGACGGATATTTGAAGGCGGGGGAATTCGGTGATGGATTGGATATAAGTGATTATTTTGAAAAGCTGAAATTGCCGTCGTCGCCGTTACGGTCACCGTCTTCTGAGTTTGAGAATAGTGTTTCTTTTGATGAGTTCTGA 1149 0.4456 MDSPTSPSTQDLNLNNLKPLKILGKGAMGTVFLIQQNNNVNTTMALKVVDKSSTHQAERRARWEIDVLSTLSHPFLPSFLGNFETAQLIGWAVPYCPGGDLNALRYQQTDRVFSITAIHFYIAEILCALQHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVRTLTVEDNRIHESQRKTRRWRIPLNRRISPVSRRGLSFSDGEKSNSFVGTAEYVAPEVIRGEGHEFAVDFWALGILSYEMLYGKTPFKGKNKKETFSNVLFKKLEFFGRKTALTDLIERLLEKDPLKRLGYVGGAEEIKEHEFFRGVKWEMLTEVERPPFIPSRGDDGYLKAGEFGDGLDISDYFEKLKLPSSPLRSPSSEFENSVSFDEF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3405 382 Pfam Protein kinase domain 20 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3405 382 Pfam Protein kinase domain 210 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3405 382 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 12 361 - -
Mtr2g3405 382 SMART serkin_6 17 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3405 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Mtr2g3405 382 ProSiteProfiles AGC-kinase C-terminal domain profile. 316 382 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr2g3405 382 PANTHER FLIPPASE KINASE 1-RELATED 12 361 - -
Mtr2g3405 382 Gene3D Transferase(Phosphotransferase) domain 1 8 194 - -
Mtr2g3405 382 SUPERFAMILY Protein kinase-like (PK-like) 8 334 IPR011009 -
Mtr2g3405 382 MobiDBLite consensus disorder prediction 362 382 - -
Mtr2g3405 382 ProSiteProfiles Protein kinase domain profile. 17 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g3405 382 ProSitePatterns Protein kinases ATP-binding region signature. 23 47 IPR017441 GO:0005524
Mtr2g3405 382 Gene3D Transferase(Phosphotransferase) domain 1 210 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3405 Mtr-Chr2 48093696 48095198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3405 7 379 AGC Kinase Gene Family AT1G51170 56.423 4.06e-142 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr2g3405 Pkinase 3.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3405 - K08286 gmx:100785281 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3405 2 48093696 48095198 Mtr4g1951 4 32813260 32814841 PCT