Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3404 ATGGGCTCAAATAACTGGCTTTCATTTCCACTTTCTCCAACTCATCATCCTTCATTACCACCTCATCTTCAACCAAATCAATCTCATCATCACTTTTCTCTTGGAACATTAGTCAATGACAACATGTTGCAAAACCCTTTCCAAAATCATGATTGGAACTTGATGAATAGTAGTCACAACTCAAACGAAGTTCCAAAGGTTGCAGATTTTCTTGGTGTGAGCAGCAAGAGTACTGAAAATGAGTCAGATCTTGCAGCCTATAATGAAATGAATAGCTCAAATCATCATTCTTTAGATAATTACTTGTTCATGCCGCCAGTACAAAATAGCTCAGCAACTTCTAGCAACAACTATGACCAATATGAAGAAAACCCTAACAATAATCTGCAGTCATTGACATTATCAATGGGAAGTGGTACTACTAAGGATTCCACATGTGATAATAATATCGTTGAAGCAGCTGCAACACCTAGAAGAGCTTTGGATACCTTTGGCCAAAGAACATCAATATATCGTGGTGTAACAAGACATAGATGGACCGGAAGGTATGAAGCTCACCTTTGGGATAATACTTGTAGAAGGGAAGGTCAGTCAAGAAAAGGACGTCAAGAACTCAACGTAATGGTGAAATCATACAAACAAGAACACGTATATAACCATCCATGGGAACGAGTAACCTCAGCATCATGGCGAAAATTCACCGACGCTGAAAACAAGCGTGTTTTACCACACATTCTAGATTGCAATACATTGAACACAAGCCTTGATTCATCCTCCGGGAAGCTGTACGCGACGCGCGCTATAACCGTTCGTTGTCCGTGGCTGGTGCGAAGGATTATCGGTGAAGACATTTGTCATTGTGTTGAATCAACAGTTGTGGATGCAAAATCGCGTTCGATGCAGATTTGTTATAGGAATATTAGTATGGAGAAGTTTATTGAAGTGGAAGAGAAGACTAGGTATGATCCACATCCGGATAATCCGAATGGATGGACTGTTTGTCAGCAGGAGACGAGGATTCGGATTAAGCCGTTGTCTGCTTTGGCTTCTATGGCGGAGAAAGTTGAGCAGAGGTGTGCTGATAGGTTTCTTCATAATAGTGCTAAGAGTAGAGATGTTATGGAGAGGATTTGCAAATATCATGAGGCTGAGTCTAGCTCATTTTCTTTGTGA 1173 0.4075 MGSNNWLSFPLSPTHHPSLPPHLQPNQSHHHFSLGTLVNDNMLQNPFQNHDWNLMNSSHNSNEVPKVADFLGVSSKSTENESDLAAYNEMNSSNHHSLDNYLFMPPVQNSSATSSNNYDQYEENPNNNLQSLTLSMGSGTTKDSTCDNNIVEAAATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNTCRREGQSRKGRQELNVMVKSYKQEHVYNHPWERVTSASWRKFTDAENKRVLPHILDCNTLNTSLDSSSGKLYATRAITVRCPWLVRRIIGEDICHCVESTVVDAKSRSMQICYRNISMEKFIEVEEKTRYDPHPDNPNGWTVCQQETRIRIKPLSALASMAEKVEQRCADRFLHNSAKSRDVMERICKYHEAESSSFSL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3404 390 ProSiteProfiles PRELI/MSF1 domain profile. 209 386 IPR006797 -
Mtr2g3404 390 Pfam PRELI-like family 223 382 IPR006797 -
Mtr2g3404 390 PANTHER PRELI DOMAIN CONTAINING PROTEIN 3A-LIKE ISOFORM X1 208 386 - -
Mtr2g3404 390 PANTHER MSF1/PX19 RELATED 208 386 IPR037365 GO:0005758
Mtr2g3404 390 Gene3D AP2/ERF domain 170 238 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3404 Mtr-Chr2 48064792 48074062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3404 1 215 AP2-EREBP Transcription Factor Family AT1G51190 52.653 1.37e-60 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3404 - - pxb:103967847 477.248