Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3399 ATGAATGGTTCTGGTTTGGGTGGTGGGTTTTTGAGTGGTCCCACTGGGGGTATTTTAGACCTTGAATCTCCATTTAACAGGCATCAACAACAGACTCAGTTAGCTCATGGTCAGCACCATATGAATATGATAACTGGTTTGGAAAATGATAGTAATCAAATTGGTTTAATTGAAGTGAAAAATTTGAATTTTGGTAAAGGGAAGGGAATTGCTAGTTCTAATCATGACAATAGTAACGATATGAGTGAAGACGATGAACATGGTTACGGAGAAGATGGGAATTGCGAGAATTTTTTCGATGGTGGGAAAGGGAAAAAAGGGTCTCCTTGGCAGAGAATGAAGTGGACGGATAATGTGGTTGGGCTTCTTATAGCAGTGGTGAGTTGTGTTGGCGAGGATGGAACAATTTCTGGTGTGGATGGTGTTAAGAGGAAATCCGGGGTTGTACAGAAGAAGGGTAAGTGGAAAACTGTTTCTAAGATAATGATAAGTAAGGGTTGTCATGTGTCGCCGCAGCAGTGTGAGGATAAATTTAATGACTTGAATAAGAGGTATAAGAGGTTGAATGAGATACTTGGTAGGGGAACTTGTTGTCAGGTGGTTGAGAACCCTGCATTGATGGATTCAATGGTTAACTTGTCTGCTAAGGCTAAGGATGATGTTAGAAAGATATTAAGCTCGAAACATTTGTTTTATAAGGAAATGTGTGCATACCACAATGGTCAAAGGATACCAAATAGTCATGATCTTGACTTGCATAGTTATTCGTTGGAACACGGGAAGGACTCGAGAGATCACGATGGCTCTGATGATGAAGATGAAGATAACAATGAAAGTGAGGACGATGAGTTGGATAATGGAATTAATATTAATGCACGTGGTGATGGAGGGAGAATGGAAGGGTTTTGTGATAGAAATAAATTAAGTGAGGAGGATGGCCACTTTTGGCCGCAGTCTATTGGGATGAAGAAACTTGAGAGTGAAATGGCAAGGGTTTTTCAAGACCCTGTAAAGTCACCGTGGGAGAAAAGAGAGTGGATTAAGCAACAGCTGTTGCAGCTCCAAGAGCAAAATGTTGACTTCCAAGCCAAGGCTTTTGAACTTCAGAAACAGCAGTTTAAGTGGTTAAGATACCGCAGCAAGAAGGATCGGGAGCTGGAGAAGCTGGCGATGGAGAACAAGCGAATGAAATTTGAAAATGAGCACAGGATCTTAAAGCTGAAGCAGAGAGAGCAGGAGGCAGAGTTCAGTAGGTCTGAGATGTCCTTAGACCCTACCTCCATTGGTATCAAGAGGCCACAAGGGAGGGAACATATCAACTTGGCTAGACAGCACTAG 1338 0.4208 MNGSGLGGGFLSGPTGGILDLESPFNRHQQQTQLAHGQHHMNMITGLENDSNQIGLIEVKNLNFGKGKGIASSNHDNSNDMSEDDEHGYGEDGNCENFFDGGKGKKGSPWQRMKWTDNVVGLLIAVVSCVGEDGTISGVDGVKRKSGVVQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMVNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNSHDLDLHSYSLEHGKDSRDHDGSDDEDEDNNESEDDELDNGININARGDGGRMEGFCDRNKLSEEDGHFWPQSIGMKKLESEMARVFQDPVKSPWEKREWIKQQLLQLQEQNVDFQAKAFELQKQQFKWLRYRSKKDRELEKLAMENKRMKFENEHRILKLKQREQEAEFSRSEMSLDPTSIGIKRPQGREHINLARQH* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3399 445 Pfam Myb/SANT-like DNA-binding domain 112 237 IPR044822 -
Mtr2g3399 445 Coils Coil 351 371 - -
Mtr2g3399 445 MobiDBLite consensus disorder prediction 416 445 - -
Mtr2g3399 445 PANTHER F16F4.11 PROTEIN-RELATED 12 419 - -
Mtr2g3399 445 MobiDBLite consensus disorder prediction 70 90 - -
Mtr2g3399 445 MobiDBLite consensus disorder prediction 268 285 - -
Mtr2g3399 445 Gene3D - 115 187 - -
Mtr2g3399 445 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 12 419 - -
Mtr2g3399 445 MobiDBLite consensus disorder prediction 258 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3399 Mtr-Chr2 48016573 48018509 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr2g3399 Myb_DNA-bind_4 2.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3399 - - ccaj:109806698 653.669