Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3390 ATGGAGTTCTCAGCGGAAGCTTTAGAGAGAGATATAAACAACATGAGGAAATATTATGGGAGTGGAAAAACAAAAGAAACATCATGGAGAGAATCACAACTAAAAGGGTTGCGTAACTTTGTCAAAGAAAATGAGGAAGAAATCTTGAAGGCCCTCAAGAAGGATTTAGGGAAGCATCATGTTGAGGCTTTTAGAGATGAGGTTGGAACGTTAAAAAAATCCATTGATTTGGCAATAAAGTCCTTCAAAAAATGGATGGCTGGTAAAGAGGCTAAACTGCCCCAAATAGCACTACTTTCAAGTGCAGAAATTGTTGCTGAGCCTCTTGGTCTAGTCCTCATAATCTCATCATGGAATTTTCCCTTTGGACTGTCCTTGGAGCCATTAATTGGAGCCATAGCTGCTGGAAATGTTGCAGTCCTAAAACCTTCAGAGTTGGCCCCTACTTCTTCTTCTCTTCTAGCCACTGTTCTACCAAATTATTTGGACAATAATGGCATTAAGATCATTGAAGGTGGACCACAGATTGGAGAGCACCTCCTACATAAAAAATGGGACAAGATTTTTTTCACTGGAAGTGCACGAGTGGGGAGGATTGTTATGTCTGCAGCAGTGGAGCATCTCACTCCTATAACATTGGAGTTAGGAGGAAAATGTCCAGCACTGGTTGATTCACTTTCAACTTCTTGGGACAGAGAGATGGCTGTGAAACGAATTTTGGTTGCAAAGTTTGGGGCTTGTGCAGGACAAGCATGCATAGCAATTGATTATGTCCTTGTAGAAAAGAGTTTCAGCTCTACATTGGTGGAATTAATGAAGGAAGGGATTAAGAAAATGTTTGGAGACAACCCAAAAGAATCCAATACCATTGCAAGGATTGTTAATAAACAACATTCCAATAGAATCAAGAGTCTTCTCAATGAACCTAATGTCAAAGAATCTGTGGTTTTTGGTGGTTCTATTCACGATGATGACTTATTTATGGAACCAACAATATTACTAGATCCCCCACTTGAATCAGCAATAATGACAGAAGAAATCTTTGGCCCTGTGCTTCCCATAATAACTGTGGAGAAGATTGAAGACGGTATTGAGTTCATAAACTCAAAGCCTAAACCTCTAGCAATTTATGCCTTCACAAAGAACAATACACTGCAGAGAAGATTGGTATCTGAAACATCATCTGGGAGCATTGTATTTAATGATGCAATTCTACAGTATATAGCGGATACCATCCCATTTGGAGGAGTTGGTGAATGTGGATTTGGCAAGTATCATGGGAAGTTCTCATTTGATGCATTCAGTCACCATAAAGCTGTGGCTAGGAGAAGTTACTACACTGATTTTTGGTTCAGGTTTCCTCCATGGAATCTTAACAAGTTCCAACTACTTGAAGAAGCTTACCATTTAAACTACACTGGAATACTTCTTGTTTTAATCGGCTTGAAGAGTTCAAAACGTTCATTGTATGAGGCTTGTAAATGA 1485 0.3933 MEFSAEALERDINNMRKYYGSGKTKETSWRESQLKGLRNFVKENEEEILKALKKDLGKHHVEAFRDEVGTLKKSIDLAIKSFKKWMAGKEAKLPQIALLSSAEIVAEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNVAVLKPSELAPTSSSLLATVLPNYLDNNGIKIIEGGPQIGEHLLHKKWDKIFFTGSARVGRIVMSAAVEHLTPITLELGGKCPALVDSLSTSWDREMAVKRILVAKFGACAGQACIAIDYVLVEKSFSSTLVELMKEGIKKMFGDNPKESNTIARIVNKQHSNRIKSLLNEPNVKESVVFGGSIHDDDLFMEPTILLDPPLESAIMTEEIFGPVLPIITVEKIEDGIEFINSKPKPLAIYAFTKNNTLQRRLVSETSSGSIVFNDAILQYIADTIPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYYTDFWFRFPPWNLNKFQLLEEAYHLNYTGILLVLIGLKSSKRSLYEACK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3390 494 PIRSF ALDH 1 477 IPR012394 GO:0006081
Mtr2g3390 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Mtr2g3390 494 SUPERFAMILY ALDH-like 12 457 IPR016161 GO:0016491
Mtr2g3390 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 IPR012394 GO:0006081
Mtr2g3390 494 Pfam Aldehyde dehydrogenase family 4 440 IPR015590 GO:0016491
Mtr2g3390 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Mtr2g3390 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3390 Mtr-Chr2 47950066 47953984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3390 1 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.002 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3390 K00128 - gmx:100798020 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3390 2 47950066 47953984 Mtr4g1935 4 32540773 32546229 PCT