Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3389 ATGAGAAAGCCAGAGATTTGTAGTACTAAAAACAACATCAATATTAATAAGAAGAAGCTTAGAAAAGGTTTGTGGTCACCAGAAGAAGATGAGAAACTTATGAACTATATGGTTAGGAATGGACAAGGATGTTGGAGTGATGTGGCAAGAAATGCTGGATTGGAAAGATGTGGCAAAAGTTGTAGGCTAAGATGGATCAATTACTTGAGGCCTGATCTTAAAAGAGGTGCTTTCTCAACACAAGAAGAAGAACTCATCATCCATTTCCATTCTCTACTTGGAAACAGATGGTCTCAAATAGCAGCACGATTACCGGGAAGAACCGACAATGAAATAAAAAACTTTTGGAATTCAACTATAAAGAAAAGACTTAAGAACTTGTCTTCTTCAACCTCACCAAATCCAAGTGATGAGTCCTCACCTGAACCTAACAAAGATTTCAATATACAACAAGGGTCCTATATTTCTATACAACATGCAAATTACAACAGCTACATGAGTATGCCTATGTTCACTTCATCATCAACATCTCCATCACCATCAATATTGCAAAACACAATTTTCAATACCATGAATATTGACACGTTGCCTGTGATGGATCATAGTGGATACTTCAACAATACAGTTACTACAATGCCATGCTTTTCGTCACAAAATCACGAAGTTGAAATTAAAGGTTCTTATTTAGAAAATGGTGTGTTTGGGAGTGTAAATATTGGAGTAGAAGGGGATATGGAGAATAAGTGCAACATAGAAACTAACCCTAACCATTCTGATTATTATTTTGATGACATAAAGATAAACAATATGCTTAGTAACTGCAATATTATTGAAAGCAATAATAATAAAATTGAAAGTAGGGGTGAAGTAGTGGAGAATTTATTTCAAGAACAATTCAACTTGGGAGAATGGGATTTTGAGGAGTTGATGAAAGATGTTTCCTCCTTTTTATTTTCTTGA 960 0.3469 MRKPEICSTKNNININKKKLRKGLWSPEEDEKLMNYMVRNGQGCWSDVARNAGLERCGKSCRLRWINYLRPDLKRGAFSTQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSSTSPNPSDESSPEPNKDFNIQQGSYISIQHANYNSYMSMPMFTSSSTSPSPSILQNTIFNTMNIDTLPVMDHSGYFNNTVTTMPCFSSQNHEVEIKGSYLENGVFGSVNIGVEGDMENKCNIETNPNHSDYYFDDIKINNMLSNCNIIESNNNKIESRGEVVENLFQEQFNLGEWDFEELMKDVSSFLFS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3389 319 MobiDBLite consensus disorder prediction 126 148 - -
Mtr2g3389 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Mtr2g3389 319 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mtr2g3389 319 PANTHER MYB TRANSCRIPTION FACTOR 1 318 - -
Mtr2g3389 319 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Mtr2g3389 319 Gene3D - 76 148 - -
Mtr2g3389 319 CDD SANT 25 69 IPR001005 -
Mtr2g3389 319 SMART sant 74 122 IPR001005 -
Mtr2g3389 319 SMART sant 21 71 IPR001005 -
Mtr2g3389 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Mtr2g3389 319 Gene3D - 12 74 - -
Mtr2g3389 319 CDD SANT 77 117 IPR001005 -
Mtr2g3389 319 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mtr2g3389 319 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Mtr2g3389 319 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Mtr2g3389 319 PANTHER MYB DOMAIN PROTEIN 55 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3389 Mtr-Chr2 47937574 47939747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3389 1 130 MYB Transcription Factor Family AT5G12870 78.462 6.01e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr2g3389 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3389 K09422 - gmx:100786151 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3389 2 47937574 47939747 Mtr4g1932 4 32501875 32504591 PCT