Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3378 ATGCATGGATTAACTATGTTCCTTTCTCTTTCTTCCACTCTTCAATTTCTTCAACCATCTTCATGCTTCCAAAACCAAACGAGTTCTTCAATTTCTATGGCTAGTTTCAAACCCAACCATAGAAGATGTGTGCTCAATTATTCAAACTGTTACACCAACAAAAAGCAGCATGGAAGAGGTGGCAATAGAATGAGGGTAATTGTGAGAGCAAAGCGTGGTGAGTCTCCTTATGAAGTTCTTGGTTTGTCTCCATCTGCATCTGTGAATGAAATCAAAAAGGCTTATAGGAAACTTGCGCTTAAGTATCATCCTGATGTTAATAAAGAGGACAATGCACAGGAGAAATTTTTGAGGATAAAACATGCATACAATACATTGCTAAATTCTAGTTCCCGCAGAAAGTATGATTCTGGAAATCGTGGTTCTAACTCTTCTCAAAGAAGCCAGAGTTGGAATCAACAAGTTGAAGAAGAATTTTATGGATTAGGTAATTTTTTGAGAGATGTTCAAATAACAATAGGAGACTTCTTTAAGGATCTTCAAGAAGAATTCAAGAACTGGGAAGCCAGTGCGGCTTCACAAGGAAAGCCGAAGAGCTTATGGGAGGAGTTGTCGGAAATAGGCGAAGAATTTGTGGAGTTCCTCGAGAAAGAACTCAATATTGTTGATTCAAATGACAATCCTCAGGGAGGAAATTCATCTAATTTATATGAAACAGAGACACCAAGTAACAGCACTCAAGGTGGAGCTAACGTTGAGGATAACCTTGATGAAATAGAAGCAACTCTAGCTAGGTTAAAAAAGGAGTTAGGCTTATAG 819 0.381 MHGLTMFLSLSSTLQFLQPSSCFQNQTSSSISMASFKPNHRRCVLNYSNCYTNKKQHGRGGNRMRVIVRAKRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDVNKEDNAQEKFLRIKHAYNTLLNSSSRRKYDSGNRGSNSSQRSQSWNQQVEEEFYGLGNFLRDVQITIGDFFKDLQEEFKNWEASAASQGKPKSLWEELSEIGEEFVEFLEKELNIVDSNDNPQGGNSSNLYETETPSNSTQGGANVEDNLDEIEATLARLKKELGL* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3378 272 MobiDBLite consensus disorder prediction 130 152 - -
Mtr2g3378 272 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 48 270 - -
Mtr2g3378 272 PRINTS DnaJ domain signature 77 95 IPR001623 -
Mtr2g3378 272 PRINTS DnaJ domain signature 95 110 IPR001623 -
Mtr2g3378 272 PRINTS DnaJ domain signature 111 131 IPR001623 -
Mtr2g3378 272 Gene3D DnaJ domain 73 194 IPR036869 -
Mtr2g3378 272 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 48 270 - -
Mtr2g3378 272 SMART dnaj_3 74 131 IPR001623 -
Mtr2g3378 272 MobiDBLite consensus disorder prediction 222 255 - -
Mtr2g3378 272 Coils Coil 249 272 - -
Mtr2g3378 272 Pfam DnaJ domain 76 136 IPR001623 -
Mtr2g3378 272 MobiDBLite consensus disorder prediction 222 252 - -
Mtr2g3378 272 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Mtr2g3378 272 SUPERFAMILY Chaperone J-domain 20 135 IPR036869 -
Mtr2g3378 272 CDD DnaJ 76 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3378 Mtr-Chr2 47837287 47842275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3378 77 137 C2H2 Transcription Factor Family AT1G74250 41.791 1.92e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3378 - - mtr:MTR_2g097690 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3378 2 47837287 47842275 Mtr2g3378 2 47837287 47842275 ECH