Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3366 ATGCTTTCTCCAAACACCTTTCTGCAAGATTTTAGTGTTCCAAACTCAGTAAACCAAGTAACAAATGGGTTTGAATTAGAAGATTCACCATCTTCACCTTCTTCTTCTGGCACAAGCTCAAATGGACAATTCTTGGAACCGACAAGATATTCCAATAACATCCTAAGATACATAAATGACATCCTCATGGATGAAGAAGATGACTTGGAGCAAAAACCTTGCATGTTGCAGGAATGTTTAAGACTTCAGGCTGCTGAAAAGTCCTTCTATGATGTTCTTGGCCATAACCAGCCTTCACCGAATGATAGCACTGACCCAGATGGAAATTTCAATTGCGCTGCTAGTTTTGAGAGAAATGGCAGCAGCTGCATCGCTGATAACTCATATGAATCTAACTGGGTCAATCATGTCGTCGAATTCGAATCTTTTCCCATACAACTAAAAAGTCCTTTAATAGAAAAAAACTACTATGACTTGACAGAAGCTGATCCAGTTGTCATCGAGACACAAGGTGCTAACCATTTTCACAACGGAACTTGGAGTTGGAATGACATTCAACCAGTGACGTTGGAAGAAGTTTTACCTTCAACAGTACCAGAAAAAAGAAGTCGTAAGATGGATAGAGATAATGATACTTGTAATGAACAAGAGGGAAGAGGTAGCAAGGTTTCAGCTATTCTCTCTGATGAATTAGAGCCACCAGAGATTTTAGATGAGGTACTGCTTTATCAGAAAGGAAAGACTCTCACTCAATACCAACAAGCATCACATAATGTTGATTCAGGAGGAAAGGCAAAGGAAACACATTCGCGTTTGAAGAAAGCATCTACGACAAACAATGCCGCGGCTGTGGATTTGTGGACCATGCTAAATCAATGTGCACAAGCTGTGGCGAGCTACGATCAAAGGAATACAGATGAGCTACTCAAACAGATTAGGCATCACTCTTCGCCTTTCGGCGATGGACTCCAACGTTTAGCTCATTACTTTGCTAATGGTCTTGAGATAAGATTGGCTGCTGAGACGCCATCATATCAGCCTCTTGATGTGGCAACTGCTGGAGATATGTTGAAAGCTTACAAACTATTTGTTACCGCGTCTCCTTTGCAGAGAGTGACAAATACTTTGCTAACCAAAACGATTTTCAAAATAGTGAAGAACGAGAGCAGCGTTCATGTTATTGATTTTGGAATTTGCTATGGTTTCCAGTGGCCGTGCCTCGTCAGAAGACTATCATTAAGACCTGGTGGTCCTCCAAAGCTTCGAATTACAGGAATTGAGCTTCCTCAACCAGGATTTAGACCTACAGAAAGGGTGGAGGAAACCGGACGGCGTCTAGCAAAATACTGCAAGAAGTTCAATGTACCATTTGAATACAACTTCATTGCACAGAAATGGGAAACCGTCTGTCTCGAGGATCTAAAGATAGACAGGAATGAAATAACTCTTGTTAGCTGTTTGTACAGACTGAAGAACCTTCCTGATGAAACTGTGGCATTGAATTGTCCAAGAGAAGCTGTGTTGAAGCTGATCAGGAAGATTAATCCAAAAGTCTTCTTCCATGGAGTTGCCAATGGAAGTTATAGCGCACCGTTTTTCCCGACTCGGTTTAAGGAAGCACTCTACCACTTCTCATCGTTGTTTGATATGTTTGAGGCTAACGTGCCTCGTGAAGACATGCAGAGGTCGATGCTTGAGAGAGGGTTGTTTGGAAGAGATGCCATAAATGTTATAGCTTGTGAGGGTGCAGAAAGGGTTGAAAGGCCTGAGACCTACAAGCAGTGGCAGGTCAGGAATAAGAGAGCTGGGTTCAAGCAAATCAGGTTGGATTCGGATTTAGTGAATGAAACGAAAACAATCGTGAAGGAGGAATACCATAAAGATTTTGTAGTCGATGTGGATGGTAAGTGGGTTTTGCAGGGATGGAAGGGACGCATTTTAAATGCTTTATCAGCTTGGGTTCCTGCTTAA 1971 0.4201 MLSPNTFLQDFSVPNSVNQVTNGFELEDSPSSPSSSGTSSNGQFLEPTRYSNNILRYINDILMDEEDDLEQKPCMLQECLRLQAAEKSFYDVLGHNQPSPNDSTDPDGNFNCAASFERNGSSCIADNSYESNWVNHVVEFESFPIQLKSPLIEKNYYDLTEADPVVIETQGANHFHNGTWSWNDIQPVTLEEVLPSTVPEKRSRKMDRDNDTCNEQEGRGSKVSAILSDELEPPEILDEVLLYQKGKTLTQYQQASHNVDSGGKAKETHSRLKKASTTNNAAAVDLWTMLNQCAQAVASYDQRNTDELLKQIRHHSSPFGDGLQRLAHYFANGLEIRLAAETPSYQPLDVATAGDMLKAYKLFVTASPLQRVTNTLLTKTIFKIVKNESSVHVIDFGICYGFQWPCLVRRLSLRPGGPPKLRITGIELPQPGFRPTERVEETGRRLAKYCKKFNVPFEYNFIAQKWETVCLEDLKIDRNEITLVSCLYRLKNLPDETVALNCPREAVLKLIRKINPKVFFHGVANGSYSAPFFPTRFKEALYHFSSLFDMFEANVPREDMQRSMLERGLFGRDAINVIACEGAERVERPETYKQWQVRNKRAGFKQIRLDSDLVNETKTIVKEEYHKDFVVDVDGKWVLQGWKGRILNALSAWVPA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3366 656 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 655 IPR005202 -
Mtr2g3366 656 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 8 655 - -
Mtr2g3366 656 Pfam GRAS domain family 288 653 IPR005202 -
Mtr2g3366 656 ProSiteProfiles GRAS family profile. 277 654 IPR005202 -
Mtr2g3366 656 MobiDBLite consensus disorder prediction 21 46 - -
Mtr2g3366 656 MobiDBLite consensus disorder prediction 200 220 - -
Mtr2g3366 656 MobiDBLite consensus disorder prediction 200 216 - -
Mtr2g3366 656 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3366 Mtr-Chr2 47733547 47736240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3366 50 655 GRAS Transcription Factor Family AT2G29060 44.013 4.69e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g3366 GRAS 3.2e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3366 - - cam:101504630 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3366 2 47733547 47736240 Mtr2g3366 2 47733547 47736240 ECH