Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3364 ATGCTTCCTCCTAACACCTTTCTGCAAGATTTTAGTGTTCCTAACTCATTGAACCATGTAACAAATGGGTTTGAGTTGGAAGAATCATCATTTTCACCTTCTTCTGTCATAAGCTCAGATGAAGATCCCCAGTATGCAGCGGATAGATATTCCAATCCATTCCTCAGATACATAAGTGACATCCTCATGGATGAAGAATATGACTTGGAGCGCGAACCTTGTATGTTGCAGGAATGTTTAAGACTCAAAGCTGCTGAAAAATCCTTCTATGATGTTCTTGGCAATAACAATCCTTCACCAGATGGTAGCACTGACCTAGATGGGAATTTCGGCCGCACTGTTAGTTTTGAGAGCAACGGCAGCAGCTGCACCACTGATAATTCATGTGAGTCTGATTCGGTTAACCTTGTTGGCGAATTTGACTCTTCTTACTTAGAACTACAAACTCCTTTAGTAGAGCAAAACTACTATGGTGTGGCACAACCTGATCCAGTGGTCAATGAGCAACAAGCTGCTAACCATTTTCAGAATGGAACTTGGAGTTGGAATGAAATTCAGCCAGTGATGGTTGAAGAGGTTTCAGCTTCATTAGTACCAAGAGAAAAGAGAAGTCATGCGATGGATGATAACGATGATACTAGTAATGAACAAGAGGGAAGAGGTAGCAAGATTTCAGCTATCTTTTCTGATGAATTAGAACCACCAGAGATCTTAGATGAGGTACTTCTTTGTCAGCAAGGAAGGACACTAACTCAACACCAACAAGCATCACAGACTGTTGATTCAGGAGAAAAGGCAAAGGCAGCACGTTCGCGATCGAAGAAAGTATCTACTACGAACAATGCCACAGTTGTGGATTTGTGGACTATGCTAACTCAATGTGCACAGGCCGTGGCAAGCTATGATCAAAGGAATACAAATGAGCTACTCAAGCAGATTAGGAAACACTCTTCGCCTTTTGGGGATGGACTTCAGCGGTTAGCTCATTACTTTGCTAATGGTCTTGAGATAAGATTTGCTGCCGAGATTCCATCGTATATGCCGCTTGATGTAGTAACTGCTGGAGATATGTTGAAAGCTTACAAACTATTCGTTACCTCATCTCCTTTGCAGAGAATGACAAATATGTTGTTAACCAATACAATTTACAGCTTAGTGAAGAATGAGAGCAGTGTTCATATTATTGATTTTGGAATTTGCTATGGTTTCCAGTGGCCATGCCTAATCAAAAAACTTTCAATGAGACCTGGTGGTCCTGCAAAGCTTCGAATTACGGGAATTGAGCTTCCTCAGCCAGGATTTAGGCCTGCAGAAAGGGCAGAGGAAACAGGAAGGCGTTTAGAGAACTACTGCAAGAAGTTCAATGTACCATTTGAATACAACTGCATTGCACAGAAATGGGAAACTATCCGGCTCGAGGATCTAAAGATAGACAGGAATGAAGTAACTCTTGTTAGCTGTTTATACAGAATGAAGAACCTGCCTGATGAAACTGTAGCAGTGAATTGTCCAAGAGAAGAATTGTTGAACCTCATCAGGAAGATTAATCCGAAAATCTTCTTCCATGGAGTTGTCAATGGAAGTTATAGTGCACCGTTTTTCCTGACTCGGTTTAAGGAAGCACTCTACCACTTCTCATCGTTGTTTGATATGTTTGAGGCTAACGTGCCTTGCGAAGACCCGCAAAGGTTGATGCTTGAGAGAGGGTTGTTTGGAAGGGATGCTATAAATGTTATAGCTTGTGAGGGTGCCGAGAGGGTCGAAAGGCCTGAGACCTACAAGCAATGGCAGGTCAGGAACAAAAGAGCTGGGTTCAGGCAAATCAGGTTTGATTCTGATTTAGTGAATGAAACCAAAGCAATGGTGAAGAAGGAATACCATAAAGATTTTGTAGTTGATGTCGATGGTAAGTGGGTTTTGCAGGGATGGAAAGGACGCATTTTGAATGCTTTATCTGCTTGGGTTCCTGCCTAA 1974 0.4205 MLPPNTFLQDFSVPNSLNHVTNGFELEESSFSPSSVISSDEDPQYAADRYSNPFLRYISDILMDEEYDLEREPCMLQECLRLKAAEKSFYDVLGNNNPSPDGSTDLDGNFGRTVSFESNGSSCTTDNSCESDSVNLVGEFDSSYLELQTPLVEQNYYGVAQPDPVVNEQQAANHFQNGTWSWNEIQPVMVEEVSASLVPREKRSHAMDDNDDTSNEQEGRGSKISAIFSDELEPPEILDEVLLCQQGRTLTQHQQASQTVDSGEKAKAARSRSKKVSTTNNATVVDLWTMLTQCAQAVASYDQRNTNELLKQIRKHSSPFGDGLQRLAHYFANGLEIRFAAEIPSYMPLDVVTAGDMLKAYKLFVTSSPLQRMTNMLLTNTIYSLVKNESSVHIIDFGICYGFQWPCLIKKLSMRPGGPAKLRITGIELPQPGFRPAERAEETGRRLENYCKKFNVPFEYNCIAQKWETIRLEDLKIDRNEVTLVSCLYRMKNLPDETVAVNCPREELLNLIRKINPKIFFHGVVNGSYSAPFFLTRFKEALYHFSSLFDMFEANVPCEDPQRLMLERGLFGRDAINVIACEGAERVERPETYKQWQVRNKRAGFRQIRFDSDLVNETKAMVKKEYHKDFVVDVDGKWVLQGWKGRILNALSAWVPA* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3364 657 MobiDBLite consensus disorder prediction 200 218 - -
Mtr2g3364 657 MobiDBLite consensus disorder prediction 252 275 - -
Mtr2g3364 657 Pfam GRAS domain family 289 654 IPR005202 -
Mtr2g3364 657 MobiDBLite consensus disorder prediction 200 221 - -
Mtr2g3364 657 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 8 656 - -
Mtr2g3364 657 ProSiteProfiles GRAS family profile. 278 655 IPR005202 -
Mtr2g3364 657 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 656 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3364 Mtr-Chr2 47727421 47730021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3364 50 656 GRAS Transcription Factor Family AT2G29060 43.740 1.01e-164 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g3364 GRAS 8.5e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3364 - - cam:101504630 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3364 2 47727421 47730021 Mtr2g3364 2 47727421 47730021 ECH
Mtr2g3364 2 47727421 47730021 Mtr4g1890 4 32053907 32056468 ECH