Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3363 ATGGATCCGAATTTTGTCGGATTCGAAACAACCTACAAATTCGATGACCATGGTAACTTAATCCTTCTCTCTGATCCAAATCCAAACCTTGACGATTTCACCATCACCAACCCTTATGTGGGCCCATCCAATTCGGAGCCACTAGTTTTTTCTTCTGATACAACCAAAGATTCTACCTTTGAAGATGCTGATTTTTCAGAAACAGTGAAATATATAAGCCAGATTTTAATGGAAGAAGAATTTGAACAAAAACCATGTATGTGTTATGACCCACTTAGTCTTCAACATACTGAGAAAATTTTCTTTGATGCTTTGGAATCAAATTTGCCTCTTTCACCTAATCAACACCCTCTTGATGTTCTTGAGATTCCTAATAGCACTTGTTGTGTTACTACTGATTCTGGTAATAGTTCTAGTTCTAATGAGTTAAAGCCTCTTTCACCTGATACACCAGTTTCTGGTGGTGATTCTGGTTTTAATTCAGTGAAGTCTCAATTTATTGTTCCAAATCATGGTTTGAATTTGAGTAATAGTAATATTAGTGATGGTGTTTTTGATTTGGATTCTTCTGAGACTAGGGTTATGGCTCAAAATATTTTTAGTGATGCTGATTCTATTTTGCAGTTTAGAAAAGGGTTAGAGGAAGCTAGCAAGTTTCTTCCACAAAAAGCTCAGCTTTTTACTGGTTTTCAGAATGCTAGTGATAGTTTAGTGTCTCATGAGCCTAAGGGTAGGGTTGGAGTGATCAAGATGGAGGGTGGTGTTAGGGAGAACTCGAATTCGAGTTATTCGAGTTCAAATTTGAATTCGGGTTATTCGAGTTCAAATTCGAATTCACATGGTTTGTTGAAGAGTAGAAAGAATCACGAGCGTCAAGAAAGTGACGATGAAGAAGGAAGAATTAACAAGCAGTCTGCGGTTTCCGTTGAGGAGAGTGAAATATCTGATATGTTTGATAGAGTTTTACTTAGTGTTGAAAATGTGCCGTTGTGTGCTGAACAAAAGGATGGATCCATGGTGGAGAGTAGAACACAGGTTGGTGAACTTGATGGAGGGAAGATGCGTTCGAAGAAACAAGGGAGGAAGAGGGATGCTGTGGATTTGAGGACCCTTTTGGTTCTGTGTGCACAAGCTGTATCTGCTAATGACAATAGGACTGCTAATGAATTGTTGAAGCAGATTAGGAACCATTCTTCTCCTTCAGGTGATGCATCACAGAGAATGGCTCATTACTTTGCGAATGCGATTGAAGCGCGCATGGTTGGTGCTGGTACCGGTACACAAATATTATATATGAGCCAAAAGATGTTTAGTGCTGCTGATTTCTTGAAAGCTTACCAAGTTTTTATCTCTGCTTGCCCTTTCAAAAAATTTGCGCATTTCTTTGCAAATAAAATGATATTGAAAACAGCTGAAAAGGCAGAAACCCTTCACATTATTGATTTTGGTATCTTATATGGTTTCCAGTGGCCAATTCTTATTAAGTTTTTGTCAAAAGTAGAGGGTGGACCACCCAAGTTGAGGATCACAGGAATCGAGTATCCCCAAGCTGGCTTTCGACCGGCAGAGAGAATCGAGGAAACTGGCCGGCGTTTAGCTAACTATTGTGAACGTTTCAATGTTTCCTTCGAATACAAGGCCATACCATCACGAAATTGGGAAACCATTCAAATTGAAGACCTTAATATTAAGAGCAATGAGGTAGTGGCTGTGAACTGTTTGGTAAGGTTTAAGAATTTACATGATGAGACAATCGACGTGAACAGTCCTAAAGATGCAGTTCTGAAGTTAATCAGGAAGATAAATCCGCACATATTTGTTCAATCCATAGTAAATGGGTCTTATAATGCCCCTTTCTTTTCCACACGCTTCAAGGAGTCACTTTTCCATTATTCTGCAATGTTTGATATGTATGATACTCTCATATCCCGTGAAAATGAATGGAGGTCGATGATTGAGAGAGAGTTTTTGGGCCGGGAGATTATGAATGTTGTAGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCCGAGACATACAAACAGTGGCAGGTTAGGAATCTAAGGGCTGGCTTTAGGCAACTCCCACTGGATAAGGAGGTAATGGTCAGATTTAGAGATAAGCTAAGAGAATGGTACCATAAAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGAATTATGTATGCTTCGGCTGGTTGGGTGCCAGCATAA 2232 0.3956 MDPNFVGFETTYKFDDHGNLILLSDPNPNLDDFTITNPYVGPSNSEPLVFSSDTTKDSTFEDADFSETVKYISQILMEEEFEQKPCMCYDPLSLQHTEKIFFDALESNLPLSPNQHPLDVLEIPNSTCCVTTDSGNSSSSNELKPLSPDTPVSGGDSGFNSVKSQFIVPNHGLNLSNSNISDGVFDLDSSETRVMAQNIFSDADSILQFRKGLEEASKFLPQKAQLFTGFQNASDSLVSHEPKGRVGVIKMEGGVRENSNSSYSSSNLNSGYSSSNSNSHGLLKSRKNHERQESDDEEGRINKQSAVSVEESEISDMFDRVLLSVENVPLCAEQKDGSMVESRTQVGELDGGKMRSKKQGRKRDAVDLRTLLVLCAQAVSANDNRTANELLKQIRNHSSPSGDASQRMAHYFANAIEARMVGAGTGTQILYMSQKMFSAADFLKAYQVFISACPFKKFAHFFANKMILKTAEKAETLHIIDFGILYGFQWPILIKFLSKVEGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCERFNVSFEYKAIPSRNWETIQIEDLNIKSNEVVAVNCLVRFKNLHDETIDVNSPKDAVLKLIRKINPHIFVQSIVNGSYNAPFFSTRFKESLFHYSAMFDMYDTLISRENEWRSMIEREFLGREIMNVVACEGFERVERPETYKQWQVRNLRAGFRQLPLDKEVMVRFRDKLREWYHKDFVFDEDNNWMLQGWKGRIMYASAGWVPA* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3363 743 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 742 IPR005202 -
Mtr2g3363 743 MobiDBLite consensus disorder prediction 339 361 - -
Mtr2g3363 743 MobiDBLite consensus disorder prediction 252 309 - -
Mtr2g3363 743 MobiDBLite consensus disorder prediction 283 304 - -
Mtr2g3363 743 MobiDBLite consensus disorder prediction 131 155 - -
Mtr2g3363 743 MobiDBLite consensus disorder prediction 255 282 - -
Mtr2g3363 743 Pfam GRAS domain family 368 740 IPR005202 -
Mtr2g3363 743 PANTHER SCARECROW-LIKE PROTEIN 34 47 742 - -
Mtr2g3363 743 ProSiteProfiles GRAS family profile. 359 741 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3363 Mtr-Chr2 47703402 47706327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3363 68 743 GRAS Transcription Factor Family AT1G07530 48.446 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g3363 GRAS 1.7e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3363 - - cam:101504630 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3363 2 47703402 47706327 Mtr2g3363 2 47703402 47706327 ECH
Mtr2g3363 2 47703402 47706327 Mtr4g1889 4 32049243 32052219 ECH
Mtr2g3363 2 47703402 47706327 Mtr4g1890 4 32053907 32056468 PCT
Mtr4g1891 4 32059289 32061817 Mtr2g3363 2 47703402 47706327 PCT