Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3362 ATGGACAAAGGAGTTGTTGATCCACTCCATGAACAAAGTAAGAGTGAATTCACTTCCACTGTTCTTGGTTTTATAAACAAATTTCTCATGGAAGATGATGACTCAGAGGAAGACTACAATATGTTCCAACATCATGAACATGAAGGGTCTTCCACTGTTCTTGGTTCTATAAACCAATTTCTCATGGAAGAAGACTTTGAAAAAGAGTACACTCAGTTCCAAGATTCTTTTGCTCTTCAACTTACTGAAAAATCATTTCATGATGTTATTGCTCACACTCCTCTTCCTCCTCCTCCTCCTCCTACTGCTGTTACTGCTATTACTACTACTCTTCCTTCTTCCATCCAGCATGAGTATCAACAAAACTACAACTTTGTGGATAGCCCTAACTTCAGTGATTATAGTTTAAGCAGTGATAGCACTAGCTCCTTTGAACTTGATCCAATTATAGACTCATACAACTACAATTACAACCCTTTTCTACTCCCAAATACTCCTCCATTTTCTCCTAATAACTTTGTTTCTCAATCTAATTCAACCATTTTCCCTTCTTTCAATAATGCTCTTTCTCATGAGGTACTTCAGACAGAAAACTTTGAAGAAGAGCATTTTCTCAATGTGTCACAAAATGGATCAGAACAAGTGTATGTAGATGATAGCGGTGAGTTATCAGAATTATTTGATAAAGTACTAGTTCTTGGTACTAAATTCACAAAAGGGCCACTTCAAAACACAAGCTTCCAGCAGAATGAAGAATTATCAAACAGATTCTATGGTTCTAGGAGACAAAGAAGTTATGAGGAAGTTGTGGATTTGAGGACACTATTGATGCTATGTGCACAATCCATTTCTTGTAATGATATTTCAAATGCTAACCAATTATTAAACCAGATTAAGAAACATTCTTCTCCAACAGGTGATGGTACTCAAAGATTGGCACATTTCTTTGGAAATGCACTCGAAGCACGTTTAGCAGGAACTGGTTCACATGTCTATAGAGCTCTATCTTCCAAGAAAAAATCTGCTGCAGATATGGTCAAAGCTTACCAAGTTTATTCATCAGCATGCCCTTTTGAAAAGCTTGCAATTATGTTCTCAAACGATGCAATTTTGAATGTAGCCAAAGAAACAGAAAGTCTTCACATTATAGATTTTGGTGTTGGTTATGGTTTCAAGTGGCTTGGTTTTATATATCGTTTATCGAAAAGATCTGGTGGGCCACCCAAATTGAGGATCACAGGGATAGATCTTCCAAATTCATTGGAGAGAGTGAATGAAACAGGTCTTAGGCTTTCAAGTTATTGCAAACGTTTCAATGTTCCTTTTGAGTACAATGGTATTGCAAAAAATTGGGAAAGTATCAAAGTTCAGGATTTTAAGATAAGGAAAAATGAGTTTGTTGCAGTGACTTGTGTGTTTAAGTTTGAGAATCTACCTGATGAGACAGTTGTTTCGGAGAATCCGAGGGGTGCTGTTTTGGATTTGATTAAGAAGGCAAATCCGAATATATTTATTCATAGCATTGTTAATGGTGGTTATGATGCACCTTTTTTTGTGACAAGGTTTAAGGAAGCTGTTTTTTATTATTCAGCATTGTTTGATATGCTTGATAACAACAATGTTGAACGTGAGGATCCTGTTAGGTTGATGTTTGAGGGAGACGTTTGGGGGAAAGATATAATGAATGTTATAGCTTGTGAAGGTTGTGATAGGGTTGAGAGGCCAGAGACATATATGCATTGGCATTCTAGGCACATGGGAAATGGGTTTAGGTCTTTGAAATTGGATAAGCAGATTATAAATAAATTGAAGTGTAAGTTGAGAGATGATGCATATAATAGTGATTTTCTGTTTGAGGTGAAGGAAAATTGGATGCTACAAGGTTGGAAGGGTAGAATTCTATTTGGTTCTTCTTGTTGGATTCCAACATAG 1932 0.3644 MDKGVVDPLHEQSKSEFTSTVLGFINKFLMEDDDSEEDYNMFQHHEHEGSSTVLGSINQFLMEEDFEKEYTQFQDSFALQLTEKSFHDVIAHTPLPPPPPPTAVTAITTTLPSSIQHEYQQNYNFVDSPNFSDYSLSSDSTSSFELDPIIDSYNYNYNPFLLPNTPPFSPNNFVSQSNSTIFPSFNNALSHEVLQTENFEEEHFLNVSQNGSEQVYVDDSGELSELFDKVLVLGTKFTKGPLQNTSFQQNEELSNRFYGSRRQRSYEEVVDLRTLLMLCAQSISCNDISNANQLLNQIKKHSSPTGDGTQRLAHFFGNALEARLAGTGSHVYRALSSKKKSAADMVKAYQVYSSACPFEKLAIMFSNDAILNVAKETESLHIIDFGVGYGFKWLGFIYRLSKRSGGPPKLRITGIDLPNSLERVNETGLRLSSYCKRFNVPFEYNGIAKNWESIKVQDFKIRKNEFVAVTCVFKFENLPDETVVSENPRGAVLDLIKKANPNIFIHSIVNGGYDAPFFVTRFKEAVFYYSALFDMLDNNNVEREDPVRLMFEGDVWGKDIMNVIACEGCDRVERPETYMHWHSRHMGNGFRSLKLDKQIINKLKCKLRDDAYNSDFLFEVKENWMLQGWKGRILFGSSCWIPT* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3362 643 Pfam GRAS domain family 272 640 IPR005202 -
Mtr2g3362 643 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 642 IPR005202 -
Mtr2g3362 643 ProSiteProfiles GRAS family profile. 263 641 IPR005202 -
Mtr2g3362 643 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3362 Mtr-Chr2 47695727 47697825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3362 50 642 GRAS Transcription Factor Family AT2G29060 43.044 2.51e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g3362 GRAS 8.4e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3362 - - mtr:MTR_2g097390 1228.39