Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3361 ATGGACAAAAGAATTGTTGATTCACACCATGAACAAAGTGAGAGTGAATTCTCTTCCCCTATTCTTGGTTATGTAAGCAAATTTCTCATGGAAGATGATGACATAGAGGAAGACTACAATATGTTCCAACACAATGAACATGATGGGTCTTCCAATGCTCTTGGTTATATAAACCGATTTCTCATGGAAGAAGACTTTGAAAAAGAATACACTATGTTCCAAGATTCCTTTGCTCTTCAACTTACTGAGAAATCATTTCATGATGTTATTGTTCACACTCCTCTTCCTCCTCCTCCTCCTATTGCTGCTGCTGCTGCTGCTGCTGCTACTACTACTACTACTACTCTCCCTTCTTCTTCTTCTTCCATCCACCATCAGAAAAACTACAAATTTGTGCATAGCCCTGACATCAGTGATTATAGTTTCAGCAGTGGTAGCACTAGCTCCTTTGAACTTGAACCAATTATAGAGACATACAACTACAATTACAACACCTTTCCACTCCCAAATACTCTTCCAATTCCTCCAAACTTTGTTTCTCAATTCGACTCAACCGTTTTCCCTTCTCATGAGGTGATTAAGACAGAAAACTTTGAAGAAGAGCATTTTCTCAATGTGTCACAAAATGAGTCAGAACAAGTATATGTAGATGATAACAGCGAGTTACCAGAATTATTTGATAAATTACTAGTCCTTGGTACTAAAGTAAAAAAAGGGCCACTTCAAAACACAAGCTTTCAGCAGAATTATGAATTATCAAACAGATTCTATGGTTATAGGAGACAGAGAAGTTATGAGGAAGTTGTGGATTTGAGGACACTATTGATGCTATGTGCACAATCCATTTCTTGTAATGATATTTCAAATGCTAACCAATTATTAAACCAGATTAAGAAACATTCTTCTCCAACAGGTGATGGTACTCAAAGATTGGCACATTTCTTTGGAAATGCACTTGAAGCACGTTTAGCAGGAACTGGTTCAAAAATCTATAGAGCTCTATCTTCCAAGAAAAAATCTGCTGCAGATATGGCAAGAGCTCACCAAGTTTATTCATCAGCATGCCCTTTTGAAAAGCTTGCAATTATGTTCTCAAACAATGCAATTTTTAATGTAGCAAAAGAAACAGAAAGTCTTCACATTATAGATTTTGGTGTTGGTTACGGTTTCAAGTGGCCTGGTTTAATGCTTCGTTTATCGAAAAGATCTGGTGGGCCACCCAAGTTGAAGATCACAGGGATAGATCTTCCAAATTTGTTGGAGAGAGTGAATGGAACAGGTCTTAGGCTTGCAGCTTATTGCGAACGTTTCGGTGTTCCTTTTGAGTTCAATGGTATTGCGAAAAATTGGGAAAGTATCAAAGTTGAGGATTTTAAGATAAGGAAAAATGAGTTTGTTGCTGTGAATTGTTATTTTAAATTTGAGAATCTACTTGATGAGACGGTTGCTCCGGAGAATCCAAGGGGTGCTGTTTTGGATTTGATTAAGAAGGCAAATCCGAATATATTTGTTCAAAGCATTGTTAATGGTTGTTATGATGCACCTTTTTTTGTGACAAGGTTTAAAGAAGCTGTTTTTCATTACTCATCATTGTTTGATATGCTTGATAACAACAATGTTGAACGTGAGGATCCTAATAGGTTGATGTTTGAGGAAGAGTTTTGGGGAAATATAATGAATGTTATAGCTTGTGAAGGTTGTGATAGGGTTGAGAGGCCAGAGACATATAGGCAATGGCATTTTAGGCACATGGGAAATGGGTTTAAGTCTTTGAAATTGGATAAGCAGATTATAGATAAATTGAAGTGTAAGTTGAGAGATGATGCATATAATAGTGATTTTCTGTTTGAGGTGAATGAAAATTGGATGCTACAAGGTTGGAAGGGTAGAATTCTATTTGGTTCTTCTTGTTGGATTCCAGCATAG 1926 0.3681 MDKRIVDSHHEQSESEFSSPILGYVSKFLMEDDDIEEDYNMFQHNEHDGSSNALGYINRFLMEEDFEKEYTMFQDSFALQLTEKSFHDVIVHTPLPPPPPIAAAAAAAATTTTTTLPSSSSSIHHQKNYKFVHSPDISDYSFSSGSTSSFELEPIIETYNYNYNTFPLPNTLPIPPNFVSQFDSTVFPSHEVIKTENFEEEHFLNVSQNESEQVYVDDNSELPELFDKLLVLGTKVKKGPLQNTSFQQNYELSNRFYGYRRQRSYEEVVDLRTLLMLCAQSISCNDISNANQLLNQIKKHSSPTGDGTQRLAHFFGNALEARLAGTGSKIYRALSSKKKSAADMARAHQVYSSACPFEKLAIMFSNNAIFNVAKETESLHIIDFGVGYGFKWPGLMLRLSKRSGGPPKLKITGIDLPNLLERVNGTGLRLAAYCERFGVPFEFNGIAKNWESIKVEDFKIRKNEFVAVNCYFKFENLLDETVAPENPRGAVLDLIKKANPNIFVQSIVNGCYDAPFFVTRFKEAVFHYSSLFDMLDNNNVEREDPNRLMFEEEFWGNIMNVIACEGCDRVERPETYRQWHFRHMGNGFKSLKLDKQIIDKLKCKLRDDAYNSDFLFEVNENWMLQGWKGRILFGSSCWIPA* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3361 641 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 640 IPR005202 -
Mtr2g3361 641 ProSiteProfiles GRAS family profile. 262 639 IPR005202 -
Mtr2g3361 641 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 640 - -
Mtr2g3361 641 Pfam GRAS domain family 271 638 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3361 Mtr-Chr2 47676762 47678893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3361 46 640 GRAS Transcription Factor Family AT2G29060 43.156 9.58e-167 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g3361 GRAS 3.6e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3361 - - mtr:MTR_2g097390 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3361 2 47676762 47678893 Mtr4g1889 4 32049243 32052219 PCT
Mtr4g1890 4 32053907 32056468 Mtr2g3361 2 47676762 47678893 PCT