Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3360 ATGGACAAAAGAGTTGTTGGTCCACACCATGAACATAGTGAGAGTGAATTCTCTTCCACTATTTCCACTATTCTTGGTTTTATAAACAAATTTCTCATGGAAGATGATGACATAGAGGAAGACTACAATATGTTCCAACATCATGAACATGAGGAGTCTTCCACTGTTCTTGGTTCTATAAACCAATTTCTCATGGAAGAAGACTTTGAAAAAGAATACACTATGTTCCAAGATTCTTTTGCTCTTCAACTCACTGAGAAATCATTTCATGATGTTATTGTTCACACTCCTCCTGCTGCTGCTGGTCTTCCTTATTCTTCTTCCTCTTCTTCGTCTTATTCTTATTCTTCTTCCATCAAGCATCGACAAAACTACAACTATGTGCATAGCCCTAACTTCAGTGATTATAGTTTCAGCAGTGGCAGCACTAGCTCCTTTGAACCTGATCCAATTATAGACTCATACAACTATAATAACAACCCTTTTCTACTCCCAACTACTCTTCCATTTCCTCCTAATAACTTTGTTTCTCAATCCAATCCAACCCTTTTTCCTTCTTTCAACAATGCTCTTTCTCATGAGGTATTTAAGACAGAAAACTTTGAAGAAGAGCATTTTCTTAATGTGTCAGAACAAGTGAAAGTAGATGATAACAGCGAGTTATCAGAATTATTTGATAAATTACTTCTTGGTACTAAAGTCACAAAAGGGCCGCATCAAAACACAAGCTTCCAGCAGAATGAAGAATTATCAAACAGATTCGGTGGTTTTAGGAGAAAGAGAAGTTATGAGGAAGTTGTGGATTTGAGGACACTATTGATGCTATGTGCACAATCCATTTCTTGTAATGATATTTCAAATGCAAACCAATTATTAAACCAGATTAAGAAACATTCTTCTCCAACCGGTGATGGAACTCAAAGATTGGCATATTTCTTTGGAAATGCACTTGAAGCACGTTTAGCAGGAACTGGTTCAAAAATCTATAGAGCTCTATCTTCCAAGAAAAAATCTGCTGCAGATATGATAAGAGCTTACCAAGTTTATTCATCAGCATGCCCTTTTGAAAAGCTTGCAATTATTTTCTCAAACAATGCAATTTTGAATGAAGCAAAAGAAACAGAAAGTCTTCACATTATAGATTTTGGTGTTGGTTATGGTTTCAAGTGGCCTGCTTTTATACACCGTCTATCGAAAAGATCCGGTGGGCCACCCAAATTGAGGATCACAGGGATAGATCTTCCAAATTCATTGGAGAGAGTGAAAGAAACTGGTCTTAGGCTTGCAAGTTATTGCAAACGTTTCAATGTTCCTTTTGAGTACAATGGTATTGCAAAAAATTGGGAAAGTATCAAAGTTGAAGATTTTAACATAAGGAAAAACGAGTTTGTTGCTGTGAATTGTTTGTTTAAGTTTGAGAATCTACTGGATGAGACAGTAGTTTCGGAGAATCCGAAGGGTGCTGTTTTGGATTTGATTAGAAAGACAAATCCGAATATATTTATTCATAGCATTGTTAATGGTGGTTACGATGAACCTTTTTTTGTGACAAGGTTTAAGGAAGCTGTTTTTCATTATTCAGCATTGTTTGATATGCTTGATAACAACAATGTTGAACGTGAGGATCCTGTTAGGTTGATGTTTGAGGGAGACGTTTGGGGGAAAGATATAATGAATGTTATAGCTTGTGAAGGTTGTGATAGGGTTGAGAGGCCAGAGACATACAGGCATTGGCATTCTAGGCACATAGGAAATGGGTTTAGGTCTTTGAAATTGAATAAGCAGATTATAGATAAATTGAAGGGTAGGTTGAGAAATGATGCATATAATAGTGATTTTTTATTTGAGGTGAATGAAAATTGGATGCTACAAGGTTGGAAGGGTAGAATTCTATTTGGTTCTTCATGTTGGGTTCCAGCATAG 1923 0.363 MDKRVVGPHHEHSESEFSSTISTILGFINKFLMEDDDIEEDYNMFQHHEHEESSTVLGSINQFLMEEDFEKEYTMFQDSFALQLTEKSFHDVIVHTPPAAAGLPYSSSSSSSYSYSSSIKHRQNYNYVHSPNFSDYSFSSGSTSSFEPDPIIDSYNYNNNPFLLPTTLPFPPNNFVSQSNPTLFPSFNNALSHEVFKTENFEEEHFLNVSEQVKVDDNSELSELFDKLLLGTKVTKGPHQNTSFQQNEELSNRFGGFRRKRSYEEVVDLRTLLMLCAQSISCNDISNANQLLNQIKKHSSPTGDGTQRLAYFFGNALEARLAGTGSKIYRALSSKKKSAADMIRAYQVYSSACPFEKLAIIFSNNAILNEAKETESLHIIDFGVGYGFKWPAFIHRLSKRSGGPPKLRITGIDLPNSLERVKETGLRLASYCKRFNVPFEYNGIAKNWESIKVEDFNIRKNEFVAVNCLFKFENLLDETVVSENPKGAVLDLIRKTNPNIFIHSIVNGGYDEPFFVTRFKEAVFHYSALFDMLDNNNVEREDPVRLMFEGDVWGKDIMNVIACEGCDRVERPETYRHWHSRHIGNGFRSLKLNKQIIDKLKGRLRNDAYNSDFLFEVNENWMLQGWKGRILFGSSCWVPA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3360 640 ProSiteProfiles GRAS family profile. 260 638 IPR005202 -
Mtr2g3360 640 Pfam GRAS domain family 269 637 IPR005202 -
Mtr2g3360 640 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 639 - -
Mtr2g3360 640 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 639 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3360 Mtr-Chr2 47663108 47665326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3360 53 639 GRAS Transcription Factor Family AT2G29060 42.950 1.01e-168 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g3360 GRAS 1.8e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3360 - - mtr:MTR_2g097390 1028.85